Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0148 ATGGATGAGTTGAACTGCGCGATGACGACGACGACGACGGAGAATAGCATTGCGGAGCTGGTTCAATGGGAGAGGTTTCTGCCGCGGATGGTGCTCAGAGTGCTGCTTGTAGAAGCTGATCATTCCACGCGCCAAATCATCGCCGCGCTTCTTCGCAAATGCATTATTGCAGTTCCGGATGGATTAAAGGCATGGGAAACATTGAAGAAGAAGGCATCTGAGCTAGATCTCATATTAACAGAAGTGGAGCTACCAGCAATATCTGGATTTGCTCTTCTTTCTTTAATCATGGAGCATGACATTTGTAAAAGCATTCCTGTCATAATGATGTCTTCTCATGATTCGGTTAACATGGCGTTGAAATGCATGTTAAACGGGGCAGTTGATTTTCTTATAAAACCCATTCGCAAGAATGAGCTTAGGAACTTGTGGCAACATGTATGGAGAAGGCACACTATTATCACTCCTACTCAAAATACAACATTTTCACCGAAAAAACTTAAAACTGCCTCAGAAGACAATTCTGCAAGCAATAAATCTAATGGTTCTGTGGCTTCCTCAAAGAAAAACAATGAATGCAGCGAGAGATTAAGTGAGGCTCAAAGCACTTGTACATCACCAATTATGGAAGCTGCGAGTACATACATGGAAAATATGCAGGATGTGTCCCAGGATGTACATTGCCAAGTTATGCAAACTCATGTGCAGAGCACTTGTGCATCCCCAATTTTTGAAGCCGAGAGTACATTTGTGGAAAATATGCAGGATGTGCCCCAGCTGGAAAGTTCTAAACTGAACAAAATTGATATGGTGGACCATGAAAAGTTTGCCAAATTTGAAAGGAAATCAGCTAAGCATAAGGATGAAACAGAGGATAAATCAATTACAATTGTATCAGAGGCTGCAAGGTGTGACAAAAGTTTTGAATTGACAGATTTAATGCTAGAACAAGACTGTGGTGTTGCTGAACCTGAAACTGAAAACGAGGATGAAATCTTAAAATCTGAGTTAGGCAGAGACAATTCTCATGTTTCTATATTGCATGGATGCAATGCTGAGCAGGTGAAACCTTCTAAAGGAGCTATTGACTTGATTGCCACATTTGGAAATCTTCCAAAGCACCCTAATGAAAACTGTAGTCTCAATGGTGGTAATACAACCAAGTTTGATTGTGAAACGCAATTGGAACTTTCCTTAAGAAGTGATTTTCCTGGCAGCTCAGGTAAACAAGCAAGTGAATCAACTGAGGAATCTCAAAGATTGAACCATTCAAATACTTCTGCCTTTTCTTGGTACAGTAATAGTAAATTGTTGCAGCCTCTTTTTTCACCACCATCGATTACATCTCCTAAAGTAAACTGGCTCAATTGGGATTCTCATGAATGCCTTAAATTATCTGGAAATTGTCAGTATGACGACTCAAATCAGAACCTGGAGAATATGATCAGTACAGTCATTGGTCAGTATGGACTCTTACCTGTTTCAGGAGTTATCTCCAAGCTTAAGTCTGAGGGACATGGTCATGTTTTTACTTCTGTTTTCTATGCACAATCTGGCATTCACCCCATGTTGAGTCCAAAACCAGTCTGCCAGAATGAGAGTTCTCCCTTTCCCACAAGTACCTCCTCCCAGTCCAATCCTGAAAGTCACTGCTCAGATCAACCTCATGACTGTTCCAATGATGCTACTTGTCTTGATCAAAATGTAAAGGATAATACTGATTCAGATCACGCAAGGCATGAGTCTCCTGCTGCTGATCAGAGTGCTGGTAATAATTTATGCCATGATGCTGCAAATCATGTTAATAGTAGTGCATATGGAAGCATGGACAGTGGAAATGATGGACATGCTACTTCAGCTATAGTATCCAAGAACACCTCAGATGGTTTCAGTGATAGTGGTTGTCATAATTATGATGGATTTAGAGTGACAGATTCTCATCACTCCAGTCAAAGAGAAGCAGCACTAGTGAAGTTTCGACTGAAGCGGAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAAAGCCGGAAAAGACTGGCAGAGCAGCGGCCTCGGGTGAAGGGGCAGTTTGTACGACAACATAATCATCCATTCGCTGAGGCTGGTGGTGATTCATGA 2121 0.4149 MDELNCAMTTTTTENSIAELVQWERFLPRMVLRVLLVEADHSTRQIIAALLRKCIIAVPDGLKAWETLKKKASELDLILTEVELPAISGFALLSLIMEHDICKSIPVIMMSSHDSVNMALKCMLNGAVDFLIKPIRKNELRNLWQHVWRRHTIITPTQNTTFSPKKLKTASEDNSASNKSNGSVASSKKNNECSERLSEAQSTCTSPIMEAASTYMENMQDVSQDVHCQVMQTHVQSTCASPIFEAESTFVENMQDVPQLESSKLNKIDMVDHEKFAKFERKSAKHKDETEDKSITIVSEAARCDKSFELTDLMLEQDCGVAEPETENEDEILKSELGRDNSHVSILHGCNAEQVKPSKGAIDLIATFGNLPKHPNENCSLNGGNTTKFDCETQLELSLRSDFPGSSGKQASESTEESQRLNHSNTSAFSWYSNSKLLQPLFSPPSITSPKVNWLNWDSHECLKLSGNCQYDDSNQNLENMISTVIGQYGLLPVSGVISKLKSEGHGHVFTSVFYAQSGIHPMLSPKPVCQNESSPFPTSTSSQSNPESHCSDQPHDCSNDATCLDQNVKDNTDSDHARHESPAADQSAGNNLCHDAANHVNSSAYGSMDSGNDGHATSAIVSKNTSDGFSDSGCHNYDGFRVTDSHHSSQREAALVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQHNHPFAEAGGDS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0148 706 Gene3D - 30 264 - -
Gso16g0148 706 MobiDBLite consensus disorder prediction 400 422 - -
Gso16g0148 706 MobiDBLite consensus disorder prediction 526 557 - -
Gso16g0148 706 ProSiteProfiles CCT domain profile. 652 694 IPR010402 GO:0005515
Gso16g0148 706 MobiDBLite consensus disorder prediction 679 706 - -
Gso16g0148 706 SUPERFAMILY CheY-like 28 158 IPR011006 -
Gso16g0148 706 Pfam Response regulator receiver domain 34 142 IPR001789 GO:0000160
Gso16g0148 706 Pfam CCT motif 652 694 IPR010402 GO:0005515
Gso16g0148 706 PANTHER PRR RESPONSE REGULATOR 7 703 - -
Gso16g0148 706 SMART REC_2 32 144 IPR001789 GO:0000160
Gso16g0148 706 MobiDBLite consensus disorder prediction 528 557 - -
Gso16g0148 706 MobiDBLite consensus disorder prediction 159 201 - -
Gso16g0148 706 MobiDBLite consensus disorder prediction 569 594 - -
Gso16g0148 706 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 703 IPR045279 GO:0009736
Gso16g0148 706 ProSiteProfiles Response regulatory domain profile. 33 148 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0148 Gso-Chr16 1597339 1602716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0148 615 694 Response Regulator Gene Family AT5G24470 56.250 8.54e-20 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gso16g0148 Response_reg 3.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0148 K12130 - gmx:100802674 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0443 7 4267801 4272476 Gso16g0148 16 1597339 1602716 GST