Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0146 ATGCTTCATATGGAAGCACAAAGCTCCCAGCATACCCAAGTTATTGAGATCAGTGGTGACTTTCCTGATGGTGGAAGGAAGATTTGTGCGGAAGCACCATGTGGGTTTGCAGATGCTGGATCCATCTCTAAGGACTCTGAAGAAAGATCAACTTCTATGCGAAAGCTTTTCATGGCAGTGGTCCTTTGTGTTATTTTCATGACCGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATATTGACTGATGCAGCACATTTGCTTTCAGATGTTGCAGCCTTTGCCATCTCCTTATTTTCATTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCTTTGGTTTCTATCCAAATGATATGGTTGCTTGCTGGGATTCTGGTATATGAAGCCATTGATAGAATCATTGCCGGTCCTAAAAGTGTGGATGGTTTTTTAATGTTTTTAGTTGCTGCATTTGGTCTTGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGCCACGGACATGATGGTCATGGTCACGGTCACGGTCACGGTCACGGACATGGACATGATGGTCATGGCCACAGTCATGGATTTACAGTGTCTACCCATTGTGATGCAAAGCATACAAAAGATGAGCACCATCACACACATGATGATCATGCACACCATCATGATGAAAACCTTTCAAAAGATGCTCACCATCATACTGAGGAAGATCACTTGCACCATCATGCTCACAAAGATGTTACTGAACCTCTTCTTGGTGAATCAAAAGGTGGAACTAAGAAGAAGAAGCAATGGAACATAAATGTGCAGGGGGCTTATCTCCATGTTCTTGGGGACTCTATCCAAAGTATTGGGGTAATGATTGGGGGAGCAGTCATATGGTATAACCCTCGTTGGCAAATAGTTGATTTAATCTGCACTCTAATCTTTTCAATAATTGTTCTGGGGACAACCATCAACATGCTGCGAAACATTTTGGAAGTCCTGATGGAGAGCACACCTCGTGAGATAGATGCTACTAAGCTTGAAAGGGGGCTGTTGGATATGGAAGATGTAGTGGCCGTTCATGAACTGCATATATGGGCCATTACAGTGGGAAAGGTTTTGCTAGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACGTGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTTTATAACATCAGCCATGTCACTATACAGATAGAGCGCTAG 1269 0.4318 MLHMEAQSSQHTQVIEISGDFPDGGRKICAEAPCGFADAGSISKDSEERSTSMRKLFMAVVLCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVAAFGLVVNIIMALLLGHDHGHGHDGHGHGHGHGHGHGHDGHGHSHGFTVSTHCDAKHTKDEHHHTHDDHAHHHDENLSKDAHHHTEEDHLHHHAHKDVTEPLLGESKGGTKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYNPRWQIVDLICTLIFSIIVLGTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADVVLDKVIDYIKRVYNISHVTIQIER* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0146 422 Gene3D Cation efflux protein transmembrane domain 52 343 IPR027469 -
Gso16g0146 422 SUPERFAMILY Cation efflux protein transmembrane domain-like 50 345 IPR027469 -
Gso16g0146 422 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 422 - -
Gso16g0146 422 TIGRFAM CDF: cation diffusion facilitator family transporter 53 422 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gso16g0146 422 Pfam Cation efflux family 56 344 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gso16g0146 422 MobiDBLite consensus disorder prediction 203 274 - -
Gso16g0146 422 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 350 421 IPR036837 -
Gso16g0146 422 MobiDBLite consensus disorder prediction 185 274 - -
Gso16g0146 422 PANTHER METAL TOLERANCE PROTEIN A1 4 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0146 Gso-Chr16 1582526 1587013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0146 27 422 Inorganic Solute Cotransporters AT3G61940 57.935 3.55e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0146 K14689 - gmx:100794876 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0441 7 4254329 4258967 Gso16g0146 16 1582526 1587013 GST