Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0142 ATGGACGCATACTCCTCCGGCGAAGAAGTGGTTGTTAAGACTAGAAAACCATATACAATCACTAAGCAAAGGGAACGATGGACAGAGGAGGAGCATAATAGATTTCTAGAAGCTTTGAAACTACACGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCCGTGCAAATAAGGAGTCATGCACAGAAGTTCTTTACAAAGCTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGACAGGCTCTTGATATAGACATTCCCCCTCCACGGCCCAAAAGAAAGCCAAACAATCCTTATCCTCGGAAGACCAGGATTGGTACCACATCATTACATAGTGGAGCAAAGGATGGAAAACTCAATTTAGTTGAATCTTCACATGTTAATCAAGCACTGGACTTGAAAAAAGAACCACTTCCAGAGAAACATGATTTAGACGAAGGGCTAACAACTGTAAAAGAAAATAAGGATGAGAACCACGCAAAAGTATTTACTCTTCTCCAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAATGAGAGTTCAATAACAATGTCTGTGCCACTGGGAAATCCATGTGCCTTCAAGGAGATTACACCTTCCGTGAAAGAGGTAATAGCACGAGATGAAAAAACTGAATCTTTTGTCACTGTTGAACCTGAAAATGGGAAGTTGGAGATCAATGATGGAAAACAGACTAATGGCACTAGTAAAGACTCCAGGTTAGAGGATTCTGATGCTTTACATATGAAATTGGTTCAAAATGAGAAACCAGATGGTCTTGATTGTGAATTAACAATAGATGGGATGCAAGGCAATCAGAATTACCCTAGGCATGTTACTGTGCACGTTGTTGATGGGAACCTTGGAACAAATACTCAAAATCCATCACAAGATATGTTGTTTCGAGATTCCATGTTTCAGCCAATAGGAGGGGTTAACGGGCAACGAAATGTTTTTACCAATACAGCTCCATCGAACACAAGTGAAAGTCAAAATAACACTGCACGATCTTCTGTTCATCAATCATTTCTTCCTTATCCTCCCTTCACACAACACAACCAAGACGATTACCAATCATTTCTTCACATGTCTTCAACATTTTCAAATCTTATTGTCTCTACCTTGATGCAAAACCCAGCAGCTCATGCTGCTGCAAGTTTCGCTGCTACATTTTGGCCGTATGCAAATCCAGAAACTTCAGCAAATTCTCCTAGGTGCTCCCAAGGAGGTTTTACAAATAGACAAATTGGTTCCCCTCCAAGCGTTGCAGCTATTGCAGCTGCTACTGTAGCAGCTGCAACTGCATGGTGGGCAGCTCATGGATTGCTTCCTTTGTGTGCTCCTCTTCATACTTCTTTTGCCTGTCCTGCATCAGTGACTACAGTTCCATCAATGAATACCGGTGAAGCACCGGCTCTGAAGGCAGAGCAAGAAAAAACTACTCTACAAAATCCTCCTCTTCAAGATCAGATGCTGGATCCAGAATACTCGGAAGCTCAACAAGCTCAACATTCAGCTTCAAAGTCACCAGCTGCCATTTTATCAGATTCTGAGAGTGGAGATGCCAAGTTAAATACTTCATCAAAGGTTACTGATCATGAGACGAACAAAACAATTTCTGAGCACCTTGATTCCAACAAAACAAAGGGAAGAAAACCGGTTGACCGTTCCTCATGTGGTTCCAACACGGCCTCTAGCAGCGATGTGGAAACTGATGCACTAGAGAAGGGTGAGAAAGGGAAGGAAGAGCCTGAAATACCTGATGCTAACCAATTAGCCATTGAGTTTAGTAATCGTCGTAGAAGCGTTAGCAACCTTACTGATTCTTGGAAAGAGGTTTCTGAAGAGGGGAGACTGGCCTTTCAGGCTCTGTTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTCATGCTTTGAAGAATACGGATCATCAAATGGACAACGCCAATGATAACAAGCAAAACATAGATGACAAAGATGAAGATCTTGACGGCAAGAAATGCAGTTCTAATTATGAAGCGATGCAGAAAAACCTGCTATTTGTAGAAAATAACGAGGGACTGTTAACCATAGGGCTTGGACAAGGAAAGCTTAAGACTCATCGAACAGGTTTTAAACCCTACAAAAGATGTTCCATGGAGGCCAAGGAAAATAGGGTTGGAGCAAGCAGCAATCAAGGTGAAGAGCAAGGTTGTAAGAGAATACGTTTGGAAGGGGAGACTTCGACTTGA 2250 0.4267 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTRIGTTSLHSGAKDGKLNLVESSHVNQALDLKKEPLPEKHDLDEGLTTVKENKDENHAKVFTLLQEVPCSSVSSANESSITMSVPLGNPCAFKEITPSVKEVIARDEKTESFVTVEPENGKLEINDGKQTNGTSKDSRLEDSDALHMKLVQNEKPDGLDCELTIDGMQGNQNYPRHVTVHVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQRNVFTNTAPSNTSESQNNTARSSVHQSFLPYPPFTQHNQDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASFAATFWPYANPETSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTSFACPASVTTVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPAAILSDSESGDAKLNTSSKVTDHETNKTISEHLDSNKTKGRKPVDRSSCGSNTASSSDVETDALEKGEKGKEEPEIPDANQLAIEFSNRRRSVSNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNTDHQMDNANDNKQNIDDKDEDLDGKKCSSNYEAMQKNLLFVENNEGLLTIGLGQGKLKTHRTGFKPYKRCSMEAKENRVGASSNQGEEQGCKRIRLEGETST* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0142 749 MobiDBLite consensus disorder prediction 501 531 - -
Gso16g0142 749 MobiDBLite consensus disorder prediction 532 559 - -
Gso16g0142 749 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Gso16g0142 749 MobiDBLite consensus disorder prediction 501 598 - -
Gso16g0142 749 Coils Coil 645 665 - -
Gso16g0142 749 PANTHER SWI/SNF COMPLEX-RELATED 2 731 - -
Gso16g0142 749 SMART sant 23 71 IPR001005 -
Gso16g0142 749 MobiDBLite consensus disorder prediction 722 749 - -
Gso16g0142 749 Gene3D - 26 73 - -
Gso16g0142 749 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Gso16g0142 749 MobiDBLite consensus disorder prediction 560 575 - -
Gso16g0142 749 PANTHER PROTEIN LHY 2 731 - -
Gso16g0142 749 MobiDBLite consensus disorder prediction 324 352 - -
Gso16g0142 749 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Gso16g0142 749 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Gso16g0142 749 MobiDBLite consensus disorder prediction 86 120 - -
Gso16g0142 749 CDD SANT 26 69 IPR001005 -
Gso16g0142 749 MobiDBLite consensus disorder prediction 576 593 - -
Gso16g0142 749 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Gso16g0142 749 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0142 Gso-Chr16 1521975 1535051 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso16g0142 Myb_DNA-binding 2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0142 K12133 - gmx:100271888 1434.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0434 7 4181763 4192946 Gso16g0142 16 1521975 1535051 GST