Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0141 ATGATGATGGAGTTTGGAGGACCCAGAGTGATCGGAGATTACATAGTGGGTCCTCGAATCGGGTCGGGTTCGTTCGCGGTGGTGTGGCGTGCAAGGAATCGAAGTTCGGGTTTGGAGTATGCGGTTAAGGAGATTGATAAGAGACAATTGAGCCCCAAAGTGAGGGAAAATCTTCTCAAAGAAATTTCTATCCTTAGCACCATTCATCACCCCAACATCATTCGACTCTTCGAGGCCATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCATCGCCATGGCAAAGTTTCTGAACCGGTTGCACGCCATTTCATGAGGCAATTGGCTGCCGGGTTGCAGGTGCTTCAAGAAAAGAACCTCATCCATAGAGATTTAAAACCACAGAATTTACTGTTGGCAACTACTGCAGCTACACCAGTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGGGATTGGCTGATACGCTATGTGGTTCACCCTATTACATGGCTCCAGAGATAATTGAAAACCAGAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAACTAGTGATTGGGAGGCCACCATTTGACGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAACTGCACTTTCCGCCAGATGCATTAAAAGTGCTACATTCTGATTGCTTGGATCTTTGCAGAAACCTTTTACGTCGAAACCCAGATGAGAGGTTAACATTCAAGGCATTCTTCAATCACAATTTCCTACGGGAACCTAGGCCTACCGTGAATGTTGAGCAGTTTCAATTACATCAATCAGAAAGATTGACAGATCATCAATTAGGTGTCTCTGCCTCCGAGAAGATTTCTCAATCACATTCTAAGTATCATGTTGTAGATAATCCAGTGGTAGTCAGTTCAGCTGCTGATGAAACCATGCTGTTGCAAAGAAAGGATGGCAAGATTACAGCTGGTACTAAGAGTGCTAAAGGGTCAACTCCAACTATTGCAAGTGATAAGCTGGGGAAGGCTGTTGATGCTGGTGCTCATTTGTCAAACCAACCCCTAGTTTCCCATTTAATGGAGTCCATTGAGAAAGATTATGTCTTTGTCAATTCCCATTTCGCATCATTCGAAGCTTTCTCTGACTACTTTGAAGCATCAGTGCAAAATAGTTCCTCACATAGGATTTCTCTGTTTTCTTCTAAGAGGACTAATATGGAGGTTGGACATGCAAAACAAACAAAGGATCTGCCCTTTTCCTCCACTGAAGTATTAGAAAATTTAAAAAGCAATAAACAGGAGGCATGTGTGGCTTCCTGTGAATTTGCTGCCTTAAGGAAAGAGAATGGAATTTCCTCACTGCACCCTTCAAACAGATTACAGCTGTTGCATCAGTATGTGCGGATCCTTGCCGAACTTTCACAAGAAAAGTATAATACAGGATTGTATCTAGAGTCGCTTGCAGTTGAGTTGGTGGTTTTAGCTATATGGAAAAAGACTCTAGAAATTTGTAGCTTTTGGATGGCCTCAATTACAAAGAGTGAGTTGCCTGGAAGCAGTTCGGCTAATGAATCCATATCTGCTAGTGATGTTGACTTGCCACAGTCTACAGAACAGAAAATAAATTTTAGTGATCCTTCATCTATCTCCCTGTGGGCGAAACATGAGTTTATTGATGCAGTTGATCGTGCTGAGAAACTATCATGTCATGTTCAAAATATGGATAGGGCAGCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAAAGCTCTCTTAATTGGGACAAGTGGTGCTGTAGATGAATATATGGAGATCAGAGATAGGGCTGCTGCATCTTACTCAAAAGCGATGCTTCTACTTTCATTTATCGTGACAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTTCTTTCCACTAATAAGGAGCGAATCTTACAATATATTCACAGCTTGCAGTCTCGTAAAAAATCTTCAGCGGAGTCCTCTTCAGAGAAAGCACATACACTTTTATCAAAGTAA 2079 0.4199 MMMEFGGPRVIGDYIVGPRIGSGSFAVVWRARNRSSGLEYAVKEIDKRQLSPKVRENLLKEISILSTIHHPNIIRLFEAIQTNDRIYLVLEYCAGGDLAAYIHRHGKVSEPVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPVMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPDALKVLHSDCLDLCRNLLRRNPDERLTFKAFFNHNFLREPRPTVNVEQFQLHQSERLTDHQLGVSASEKISQSHSKYHVVDNPVVVSSAADETMLLQRKDGKITAGTKSAKGSTPTIASDKLGKAVDAGAHLSNQPLVSHLMESIEKDYVFVNSHFASFEAFSDYFEASVQNSSSHRISLFSSKRTNMEVGHAKQTKDLPFSSTEVLENLKSNKQEACVASCEFAALRKENGISSLHPSNRLQLLHQYVRILAELSQEKYNTGLYLESLAVELVVLAIWKKTLEICSFWMASITKSELPGSSSANESISASDVDLPQSTEQKINFSDPSSISLWAKHEFIDAVDRAEKLSCHVQNMDRAAEMPDAMEIIFQKALLIGTSGAVDEYMEIRDRAAASYSKAMLLLSFIVTEAENLPLNPPFSLLSTNKERILQYIHSLQSRKKSSAESSSEKAHTLLSK* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0141 692 SUPERFAMILY Protein kinase-like (PK-like) 10 316 IPR011009 -
Gso16g0141 692 SMART serkin_6 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0141 692 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 468 667 IPR045269 GO:0004674|GO:0006914
Gso16g0141 692 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 301 IPR045269 GO:0004674|GO:0006914
Gso16g0141 692 Pfam Protein kinase domain 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0141 692 ProSiteProfiles Protein kinase domain profile. 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0141 692 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Gso16g0141 692 PANTHER BNAC06G18300D PROTEIN 468 667 - -
Gso16g0141 692 PANTHER BNAC06G18300D PROTEIN 9 301 - -
Gso16g0141 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Gso16g0141 692 Gene3D Transferase(Phosphotransferase) domain 1 7 347 - -
Gso16g0141 692 CDD STKc_ATG1_ULK_like 20 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0141 Gso-Chr16 1515075 1520664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0141 10 262 CBL-interacting serine-threonine protein kinases AT2G30360 36.882 6.09e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gso16g0141 Pkinase 8.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0141 - K08269 gmx:100782508 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0433 7 4175001 4180910 Gso16g0141 16 1515075 1520664 GST