Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0136 ATGGAGAACATAATTTCCATATGTGATCACATGCCTGTAGGATTCAGATTCCGTCCCACAGATGAAGAGCTTGTCGACTATTACCTCAAACACAAGCTTCTGGCTGATGATTTCCCTGTCCACATCATCCCTGAAATCGACCTTTGCAAGGTGGAACCTTGGGACGTACCAGGAAGATCAGTGATCAAATCCGATGACCCAGAATGGTTTTTCTTCAGTCCTGTGGATTACAAGTACTTGAAGAGTAAAAGGTTTAACAGGACAACCAAGCGTGGCTTCTGGAAAGCCACTGGGAATGACCGGAAAATAAGGATACCGGGCACCAGCAATGTCATTGGGACTAAGAAGACTCTTGTTTTCCACCAAGGCCGTGTTCCCCGTGGTGCCAAGACCAACTGGGTTATTCATGAATACCATGCTGTTACCTCCCATGAAAGCCAGAGGGCTTTTGTTTTGTGCCGCTTGATGAAGAAAGCTGAGAAAAAAAATGAAGGGGGAATTGAGGCACCGTCTTTTGATGAAGGGGAGCCCAGTATACACATGGTTTCTGACTATGGAAATCCGGCAAGAGCAGAAGGCATTGCATCTGTAGATATTATTCCTGGAGTAGATATGGATGAAATCTTTCGGGCAGTGGATCAAGCTGAGAAATTCTCCCCCCCAGTACAACAGTCTCCAACTGGCATTGGGCTGGAAGATTTTTTCCCAAACTCTCCATTGTTCAATGCCCGTTTTGGAAGTGAAAACATCAATATGCAAACTTCACTTGAAGTTACAGATGACGAAGATGAGTTGGTAAATTCATTTTTGGTTTATGATGAAGAATTTGTTATCAATGAAGAAAGAAGACACTGTTTTGTCAATAGTTCCACCCAACCAAAGTCATTGAGAAGGGTATACAATGAAAGCAGTGAAATGGATGCTGAAGTTGTCTCTAATCTGAATGAACACATTAGTTCTGGTGAATACCCTGCATTGAAAATGTTTAAATCGTCACATGATGTTGTCCGTGGTGGCCCAAGTCGTCTAGCTTTGAACCAAAAAGCAAACAAAGAGAAAAAGGAGAGTATCATTCAAGATGATCTTTGGGCAGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCAATTGAAATTTCTAGCTCTCCTTCCACTCCAACAAGATTGAAAAATCAGTATCATCTAAGACCAGAAAACCTCATATTACAAAGAACTGTAGCAGGAAGACCTCAAACACAGAAGGTTTCAAACAATGCAGTATCCCATCTAGAGGTTCAGAAGGAATTGCTCACTGTGAAATCAGAAAAAGATCAGAAAAATGCTCAAAATACTAGTTCAAGAGGGAACTTAAAAAACAAAAGCCAACAATCCTCTGATGTCAACAACAATGGTTCTTTCTTTTACATGGAGATGACTTCAAATCAAAGCCTATTTCCACGTTCGGTGTATCTTGTAAATGTTGTCATAGGGATTTTGTTGTTAATAGTCATTAGTTGGGACGTATTATCATGTTAG 1518 0.4117 MENIISICDHMPVGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPGRSVIKSDDPEWFFFSPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLVFHQGRVPRGAKTNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPSFDEGEPSIHMVSDYGNPARAEGIASVDIIPGVDMDEIFRAVDQAEKFSPPVQQSPTGIGLEDFFPNSPLFNARFGSENINMQTSLEVTDDEDELVNSFLVYDEEFVINEERRHCFVNSSTQPKSLRRVYNESSEMDAEVVSNLNEHISSGEYPALKMFKSSHDVVRGGPSRLALNQKANKEKKESIIQDDLWAVETSSCDSTADEPIEISSSPSTPTRLKNQYHLRPENLILQRTVAGRPQTQKVSNNAVSHLEVQKELLTVKSEKDQKNAQNTSSRGNLKNKSQQSSDVNNNGSFFYMEMTSNQSLFPRSVYLVNVVIGILLLIVISWDVLSC* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0136 505 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 8 458 - -
Gso16g0136 505 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 458 - -
Gso16g0136 505 SUPERFAMILY NAC domain 8 158 IPR036093 GO:0003677|GO:0006355
Gso16g0136 505 MobiDBLite consensus disorder prediction 433 459 - -
Gso16g0136 505 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Gso16g0136 505 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Gso16g0136 505 MobiDBLite consensus disorder prediction 437 459 - -
Gso16g0136 505 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0136 Gso-Chr16 1435229 1438859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0136 9 160 NAC Transcription Factor Family AT3G49530 55.414 1.93e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso16g0136 NAM 4.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0136 - - gsj:114390609 993.03