Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0133 ATGGCTTCCTCGTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCCACACCAAGTTCCCAGAAGAATGGATCACTCTTGGGAAGCACAAAAGCTTCTTTTCTTAGTGGGAGGAAACTGAAGGTGAACAACTTTACAGCACCAGTTGGAGCACGATCCAGCACTACAGTTTGCGCAGTTGCTGAGCCTGATAGGCCTCTGTGGTTCCCAGGCAGCACCCCTCCTCCATGGCTAGATGGCAGTTTGCCAGGAGATTTTGGCTTTGATCCTCTAGGTCTTGCATCTGATCCTGAGAGCCTGAGATGGAATGTCCAAGCAGAGCTTGTGCACTGCAGATGGGCCATGTTGGGAGCTGCTGGCATTTTCATCCCAGAATTCCTCACAAAGATTGGTATCCTGAACACCCCTTCATGGTACACTGCTGGAGAGTTGGAGTACTTCACAGACACCACCACACTCTTCATAGTTGAGCTCTTTTTCATCGGTTGGGCCGAGGGTAGAAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACAGGAACTGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCACTTGGCTGGGGAAGTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGGGCATGGTTCCAGCACATTTACACTGGCACTGGTCCTATTGACAACCTCTTTGCTCACCTTGCAGATCCTGGCCATGCTACTATTTTTGCTGCTTTCACTCCCAAGTGA 813 0.5092 MASSCASSAIAAVAISTPSSQKNGSLLGSTKASFLSGRKLKVNNFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0133 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Gso16g0133 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 270 - -
Gso16g0133 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
Gso16g0133 270 SUPERFAMILY Chlorophyll a-b binding protein 62 268 - -
Gso16g0133 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 270 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0133 Gso-Chr16 1408524 1410824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0133 46 270 Chloroplast and Mitochondria Gene Families AT3G61470 88.496 1.60e-149 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0133 K08908 - gmx:100802138 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0424 7 3989535 3991827 Gso16g0133 16 1408524 1410824 GST