Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0126 ATGGTGCTGGATCCAGCAAGGCTGGTGCTGGTGCTTTTGATCAGCACCTGCATTTTGGCCATCAATGGTGACACAGATCCAAATGACGTTACTTCTCTAAAGGTTTTGTTTCAAAGTATGAACTCACCTTCCCAGCTAAATTGGAATGGTGATGATCCCTGTGGACAGTCTTGGCAAGGCATCACTTGCTCTGGCAATCGAGTCACAGAGATTAAGTTACCTGGTCGTTCACTTTCTGGATCTTTGGGTTACCAGCTAGAACCCTTGTCATCTGTCACAAACCTAGACTTAAGTAACAACAATATTGGTGGCACCATACCATACCAACTTCCTCCTAATCTGCAGTACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATCCCTTATTCCCTTTCTGAAAAGACTTCGCTTGTAATCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTTCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCGTTCAATTCTTTGACAGGTGACCTGCCTCAGACTATGAGCTCACTTTCTAGCATAAGAACCATGTATCTGCAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGGAACTTTGAATGTGGGAAACAATCATTTTACTGGCTGGATACCAGAACAATTGAATAACATAATACAAAAGGATGGTAATGAATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGTAGTATCAAGAAATCGAAATCACAAATCTGGGGGTCATAGCCCATCAGATGCTGGCTCAAGTGACGGTGGAGGCAAAAAATCTGGTATAGGAGGTGGTGGCATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGAGCAATAGTAGCATTCTTTCTGGTGAAGAGAAGATCCAAAAAGTCATTTAATGATGTTGAAAAGCTTGACAATCAACCCTTGGCTCAACATGAAGTGCACGAAATGAATTCCATGCAAACTTCATCTGTAACTGATTTTAAGACATTTGATACATCTGCGGCCCCAATAAGCCTTAAACCTCCTCCTTTTGATCGTCGCAAATCATTTGATGAGGATGAGTTTTCAAACAAGCCCGTTATAGTCAATAAGCCCACTAAAGTCAAGAAGACTGTAACAGCTCCTGCAAATGTAAAATCATATTCTATAGCTGACCTCCAGATTGCTACTGGAAGCTTCAGCGTGGAGCAACTTCTTGGTGAGGGGTCTTTTGGACGCGTATACCGTGCTCAATTTGATGACGGAAAGGTTCTTGCCGTGAAGAAGATCGATTCATCTGTCCTTCCCAATGATATGTCTGACGATTTTGTAGAACTAGTTTCAAACATATCCCAATTGCATGATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGCCAACACCTACTAGTCTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTACCTGATGAGTGTAGTAAACCATTGATATGGAATTCACGAGTGAAAATTGCTTTGGGGATTGCACGCGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCGGCCAACATATTGCTTGATACAGATTTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTAAACAATAATGCTGGATCTGGATATGAAGCTCCCGAAGTTGGTTTGTCTGGTCATTATACTCTTAAGAGTGATGTTTATAGCTTCGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCGTTTGATAGCTCAAGGCCGAGGTCTGAGCAGGCGTTGGTTCGATGGGCAACACCTCAACTCCATGATATCGATGCTTTGGCTAAAATGGTTGATCCTGCATTGGAAGGACTATACCCTGTGAAGTCCCTTTCTCGATTTGCGGATGTTATTGCTCTATGCGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAGCGAACTAACATGAGCAAGAGGACGTTTGGAACTGATCAAGGAGGATCCAACAGAGGGGGTGATGATAATCAAGATACACAAGACATGTAA 2148 0.4278 MVLDPARLVLVLLISTCILAINGDTDPNDVTSLKVLFQSMNSPSQLNWNGDDPCGQSWQGITCSGNRVTEIKLPGRSLSGSLGYQLEPLSSVTNLDLSNNNIGGTIPYQLPPNLQYLNLANNNFNGAIPYSLSEKTSLVILNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTMSSLSSIRTMYLQNNQFTGTIDVLANLPLGTLNVGNNHFTGWIPEQLNNIIQKDGNEWSSGPAPPPPPGTPPVVSRNRNHKSGGHSPSDAGSSDGGGKKSGIGGGGIAGIVISILVVGAIVAFFLVKRRSKKSFNDVEKLDNQPLAQHEVHEMNSMQTSSVTDFKTFDTSAAPISLKPPPFDRRKSFDEDEFSNKPVIVNKPTKVKKTVTAPANVKSYSIADLQIATGSFSVEQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDMSDDFVELVSNISQLHDPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDECSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDFNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGLSGHYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQALVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDNQDTQDM* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0126 715 PANTHER OS01G0253100 PROTEIN 15 711 IPR045271 GO:0004714|GO:0006468
Gso16g0126 715 Gene3D Phosphorylase Kinase; domain 1 372 486 - -
Gso16g0126 715 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0126 715 MobiDBLite consensus disorder prediction 254 268 - -
Gso16g0126 715 PRINTS Leucine-rich repeat signature 92 105 - -
Gso16g0126 715 PRINTS Leucine-rich repeat signature 159 172 - -
Gso16g0126 715 MobiDBLite consensus disorder prediction 692 708 - -
Gso16g0126 715 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 15 711 - -
Gso16g0126 715 SUPERFAMILY L domain-like 27 229 - -
Gso16g0126 715 MobiDBLite consensus disorder prediction 692 715 - -
Gso16g0126 715 MobiDBLite consensus disorder prediction 232 277 - -
Gso16g0126 715 Gene3D Ribonuclease Inhibitor 138 235 IPR032675 -
Gso16g0126 715 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Gso16g0126 715 SUPERFAMILY Protein kinase-like (PK-like) 386 681 IPR011009 -
Gso16g0126 715 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524
Gso16g0126 715 Gene3D Transferase(Phosphotransferase) domain 1 488 702 - -
Gso16g0126 715 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Gso16g0126 715 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0126 Gso-Chr16 1352659 1361113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0126 9 706 Strubbelig Receptor Gene Family AT1G53730 65.782 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso16g0126 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0126 - - gmx:100817422 1324.69