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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso16g0105
ATGTTTCCGTTTCATTCTCAAGGAACTCCGAAACACACTTGCACTCTTCTCGCTGTGACCTGCAGAACAAGTTCCGCTGAGCACAAACTCTCACATGCTCAGCGCACATATCCTTTCCCTGAGTTAGTTTCCGCGGGGCGTCTTGAGGTTCAAACTCTTTGCAGTCCGGAGAAGGAACAGTTTCGGAAAGTTCTGGAGTCGTTTCAACCGAATTTTGTTTACTTGCGAGGAGACCAGCTAGAGAATGGGGAAGTAGGTTCGCTGGTTTGGCAGGGTGTGGAATTATCCACTTGTGAAGATATAACAGAGCTCTTTGGTTCCACATTGCCAACGGCTGTTTATTTAGAAATACCAAATGGAGAAAGTTTTGCAGAGGCTCTTCATCTTAAGGGAATCCCATATGTTATATTTTGGAAGAATACCTTCTCTTGTTATGCTGCCTGCCATTTTCGTCAAGCATTTCTTTCAGTAGTACAAAGTTCATCTACACATACATGGGATGCTTTCCACCTTGCACGTGCCTCTTTTGAACTTTACTGTGTCCAAAACAATCAAGTACTTCCTTCTGATAGCGATGATGCTAGTAGTGAGATGGGGCCACACCTTCTTGGCGACTGTCTCAAAATCAATGTCGACCCTCCAGAGATCGATGAAGAGGATGATGACGAAAGTTCCTCAGGAAGTTTGCCTGCCATAAAGATACATGAGGATGAAGTGAACTTGAGATTTCTCATCTGTGGTGCACCTTCGACTGTTGATGAGTCATTGCTGAGATCTTTGGAGGATGGACTCAGAGCTCTCTTAACTATTGAAATACGTGGTTGCAAGCTCCATGGCAAGTTTAGTGCCCCACCACCACCTCTTCAGGCAGCCGCTTTTTCTCGCGGAGTTGTGACCATGCGATGTGATATATCAACCTGTAGTTCTGCACATATCTCACTTCTGGTATCCGGCAGTGCACAAACTTGTTTTAATGATCAGCTCTTGGAGAATCATATAAAAAATGAGATAATTGAGAAGAGTCAACTAGTTCACGCACAACTCAACAATGAGGGAAACAAAGAGAACATCTGTGAACCTCGCAGATCTGCTTCTATTGCCTGTGGAGCATCTGTATTTGAAATTTGCATGAAGCTACCTCAATGGGCTTTGCAGATTTTGAGACAGCTAGCACCTGAGGTTTCTTATCGAAGTTTAGTTGCACTTGGCATTGCTAGTATTCAGGGGTTGCCTATAGCTTCTTTTGAGAAAGATGATGCTGAACGCTTACTGTTCTTCTATCAAAACTGTGAGAAAGATAGCTGTACAAACAAAAATAATATAATTTTTAGCAGTCCCCCTGGTTGGTTGAAACCACCCCCTCCTACTAGGAAAAGGTGTGAACCAAGACAAGAGGCTAGCCCTGGTCTTCATGAAGGTGTCTTTGCAGGGCAGGGTGGTGTTTGTAAATTAAATGAAGAGGAAAAGGACAGAAAAATTGTCAATGGGATTAGCATGCCGTTAACTCCTGCTAGGCAGAGATTAAAAGTATCTGCAATGAGGCCAATTCCTCACATTCGTCGCCATAGAATGACACCTTTTTGTGGGCCTTCTGAGACAGATGGTTTTGATGGCACTCAGGTAGAGGCTATTTTGCCACTTGTTGCCCCTACGAAGCGTACTAGTATTGGATCAACATCTGGAACACACAGAAAATCATTTTCAAGTGCAGCTCAGTCTAAGCAGGTTATTTCATTGAACCCATTGCCTCTTAAGAAACATGGTTGTGGTAGAGGCCCAGTACAGACATGCTCTGAGGAGGAATTTCTTAAAGATGTCATGGAGTTTCTGATTCTCCGGGGACATAATAGACTGATTCCTCAAGGAGGGCTTACCGAGTTCCCTGATGCCATACTCAATGGAAAACGCCTTGATCTCTACAATCTATATAAAGAGGTGGTTACCAGGGGAGGATTTCATGTTGGCAATGGCATCAACTGGAAGGGACAAATCTTTTCAAAGATGCGCAATTACACAACAACCAATAGAATGACTGGTGTTGGGAATACTCTCAAGCGACATTATGAGACCTACCTTTTAGAATATGAATTAGCACATGATGATGTGGATGGAGAATGTTGCTTGTTGTGTCACAGTAGTGCAGCTGGTGATTGGGTGAATTGTGGCATATGTGGTGAATGGGCCCACTTTGGCTGTGACAGAAGGCAGGGTCTTGGTGCATTTAAGGATTATGCAAAAACAGATGGGCTAGAATATATATGTCCTCATTGTAGTGTTACAAATTTCAAGAAGAAACAAAATGTTGCTAATGGGTATTCTCAAGGGTCAATGTCTTCACGACCCCTTTGA
2349
0.4338
MFPFHSQGTPKHTCTLLAVTCRTSSAEHKLSHAQRTYPFPELVSAGRLEVQTLCSPEKEQFRKVLESFQPNFVYLRGDQLENGEVGSLVWQGVELSTCEDITELFGSTLPTAVYLEIPNGESFAEALHLKGIPYVIFWKNTFSCYAACHFRQAFLSVVQSSSTHTWDAFHLARASFELYCVQNNQVLPSDSDDASSEMGPHLLGDCLKINVDPPEIDEEDDDESSSGSLPAIKIHEDEVNLRFLICGAPSTVDESLLRSLEDGLRALLTIEIRGCKLHGKFSAPPPPLQAAAFSRGVVTMRCDISTCSSAHISLLVSGSAQTCFNDQLLENHIKNEIIEKSQLVHAQLNNEGNKENICEPRRSASIACGASVFEICMKLPQWALQILRQLAPEVSYRSLVALGIASIQGLPIASFEKDDAERLLFFYQNCEKDSCTNKNNIIFSSPPGWLKPPPPTRKRCEPRQEASPGLHEGVFAGQGGVCKLNEEEKDRKIVNGISMPLTPARQRLKVSAMRPIPHIRRHRMTPFCGPSETDGFDGTQVEAILPLVAPTKRTSIGSTSGTHRKSFSSAAQSKQVISLNPLPLKKHGCGRGPVQTCSEEEFLKDVMEFLILRGHNRLIPQGGLTEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTTTNRMTGVGNTLKRHYETYLLEYELAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSVTNFKKKQNVANGYSQGSMSSRPL*
783
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso16g0105
782
Pfam
ARID/BRIGHT DNA binding domain
599
696
IPR001606
GO:0003677
Gso16g0105
782
SMART
ARID_2
593
696
-
-
Gso16g0105
782
SUPERFAMILY
ARID-like
596
711
IPR036431
GO:0003677
Gso16g0105
782
CDD
PHD_ARID4_like
706
757
-
-
Gso16g0105
782
PANTHER
AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4
5
772
IPR042293
-
Gso16g0105
782
Gene3D
-
594
699
IPR036431
GO:0003677
Gso16g0105
782
SUPERFAMILY
FYVE/PHD zinc finger
692
760
IPR011011
-
Gso16g0105
782
SMART
bright_3
597
701
IPR001606
GO:0003677
Gso16g0105
782
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
700
763
IPR013083
-
Gso16g0105
782
PANTHER
AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4
5
772
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gso16g0105
Gso-Chr16
1140744
1148310
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso16g0105
4
771
ARID Transcription Factor Family
AT3G43240
60.696
0.0
936
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TR
ARID
Gso16g0105
ARID
2.2e-14
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso16g0105
-
-
gmx:100816540
1580.46
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso7g0398
7
3760403
3767974
Gso16g0105
16
1140744
1148310
GST
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