Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0094 ATGGGAGCAAGAGAAAGCAAGTTAAGGAAATGGGTGATGAGTGGTGGAAGTGCTTATTATAAGCGCTTAGAAGGCACTCTATTGGTACCTAAGGGTTATGTTCCAATATGTGTTGGCAAAACTGATGATACTTGCAAGCGGTTTATGGTTCACACTAGAGCACTTCGTGATGCATATTTCAAAGAGCTGCTGGGTAGGTCTGCTGAGGAATATGGTTTTAAGAATGAAGGGGTTCTGAGGATCCAATTCGAAGCTCAAGATTTTGAAGAATGGTTGATCAAAAGGTCCAATTCCAATGAGAAGATTACAAGTAAGAGGAGGGTTAAACCAATTTAA 336 0.4048 MGARESKLRKWVMSGGSAYYKRLEGTLLVPKGYVPICVGKTDDTCKRFMVHTRALRDAYFKELLGRSAEEYGFKNEGVLRIQFEAQDFEEWLIKRSNSNEKITSKRRVKPI* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0094 111 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 110 IPR003676 GO:0009733
Gso16g0094 111 PANTHER SMALL AUXIN-UP RNA-RELATED 3 110 - -
Gso16g0094 111 Pfam Auxin responsive protein 29 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0094 Gso-Chr16 1024145 1024480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0094 15 109 Calmodulin-binding Proteins AT2G24400 37.736 1.84e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0094 K14488 - gmx:102666083 228.409