Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0077 ATGTCCCACTCCCACAGGGCAGAAGACAAGTATTTTTTTGCACATACGCAACGCAATTTTACCCAACAAAACTCTCTCTCTTTCTCTCACTTTCTAATAATGGAGAGCCTCCCGCTTGAGACGGCGGAGAAGATCATCCTGCGCTGGGACTCCACCGCGTCGGAGGATGCCCGCGACAAGATGATATTCTCCGGCGGCGTGGACCGCGATGAGGCCGATCTCTACCTCCAAGCCGTGGACGAAATCCAACGGTCCCTCTCCTCCGTCTCCGTCTCCTCCTCCGACAAAGTCAACTCCGCCATCCAGATTGCCATGGCCCGCTTAGAAGACGAGTTCCGCAACATCCTCATCTCCCACACCATCCCCTTCGACCCTTCCACCTCCGAAGACGATCCCTCCCAAACCCTCCCAGACCTTCTTCCTTCCTCCACCTCTTCCCCAAAACACCCTCTCACCAACCTCGAACAAGATTCAACAGAAACTGAGCCAGAAACTACTAACACCACCACCACCACCACTCCTCTCCTCCGTTTCAACAGTGACGGCGCTGCTTCCTCTGTTCACTCTTCTGTTTCCTCCGTCAACTCCGTTAACAGCAGCAGTTACCGTTCCACCAGCAGCATCCGCGAGATCGATCTGATCCCCTCCGACGCCGTCTACGACCTCCGCTGCATCGCCGAGCGCATGCTCTCCTCCGGCTACCTCCGCGAGTGCATCCAGGTCTACGGCAGCGTTCGAAAATCCTCCGTCGACGCGAGCTTCCGCAAGCTCCACATCGAAAAGCTCAGCATCGGAGACGTTCAGCGCCTCGAGTGGGAGCAGCTCGAGAACAAAATCAGACGCTGGATAAAAGCCGCCAAGGTCTGCGTCAGAACTCTCTTCGCGAGCGAGAAGAAGCTCTGCGAGCAAATCTTCGACGGCGTCGGAACTTCCATCGACGACGCTTGCTTCATGGAGACGGTGAAAGGTCCCGCGATTCAGCTCTTCAACTTCGCCGAGGCGATTAGCATAAGCCGTAGGTCGCCGGAGAAGCTGTTCAAGATTCTCGATTTGCATGACGCCTTGACGGATTTGATGCCGGATATCGACGTCGTGTTTGATTCGAAGTCGTCGGAGTCGATTAGGGTTCAGGCGGCGGAGATTTTGTCGCGGTTGGGTGAGGCTGCGAGGGGGATTTTGTCCGAATTCGAAAACGCTGTGCTGAAGGAACCTTCTAGGGTTCCTGTTCCTGGTGGAACGATTCACCCTTTGACTCGGTATGTGATGAATTACATAAGTTTGATCTCTGATTACAAGGTTACTTTGAATGAGCTTATAGTGTCGAAGCCCTCCACGGGGTCTAGGTATTCGGGAGATGTTGGGATACCAGATATGGATTTGAGTGAGTATGAGGAGAAGACACCTTTGGATGTTCACTTGATTTGGATTATTGTGATTTTGCAATTCAACTTGGATGGGAAGAGTAAGCACTACAGGGATGCTTCTCTGGCTCACCTTTTTATCATGAACAATGTGCACTACATTGTTCAGAAGGTGAGAGGGAGTTCCGAGTTGAGGGAGATGATTGGGGATGACTACTTGAAGAAGCTCACCGGGAAGTTCCGGCAGGCTGCCACGAGATACCAGAGGGAGACGTGGGTGAAGGTGTTGTATTATTTGAGGGACGAGGGGTTGCATGCCAGTGGGGGGTTTTCATCCGGGGTGTCCAAGAGTGCTCTCAGGGATAGGTTTAAGACTTTCAATTCCATGTTTGAGGAGGTTCACAGGACGCAGGCGGTTTGGTTGATACCGGATTCACAGCTCAGGGAGGAGCTGAGGATATCTATATCGGAGAAGCTCATTCCCGCGTATAGGTCGTTTCTTGGGAGGTTCAGGAGCTACATTGAGAGTGGGAGGCATCCGGAGAATTACATCAAGTACTCTGTGGAGGACCTGGAGTATGCTGTTTTGGACTTCTTCGAAGGGATTCCTGTTTCCCAGCACTTGAGAAGGAGATCTGAATGA 2004 0.5254 MSHSHRAEDKYFFAHTQRNFTQQNSLSFSHFLIMESLPLETAEKIILRWDSTASEDARDKMIFSGGVDRDEADLYLQAVDEIQRSLSSVSVSSSDKVNSAIQIAMARLEDEFRNILISHTIPFDPSTSEDDPSQTLPDLLPSSTSSPKHPLTNLEQDSTETEPETTNTTTTTTPLLRFNSDGAASSVHSSVSSVNSVNSSSYRSTSSIREIDLIPSDAVYDLRCIAERMLSSGYLRECIQVYGSVRKSSVDASFRKLHIEKLSIGDVQRLEWEQLENKIRRWIKAAKVCVRTLFASEKKLCEQIFDGVGTSIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTDLMPDIDVVFDSKSSESIRVQAAEILSRLGEAARGILSEFENAVLKEPSRVPVPGGTIHPLTRYVMNYISLISDYKVTLNELIVSKPSTGSRYSGDVGIPDMDLSEYEEKTPLDVHLIWIIVILQFNLDGKSKHYRDASLAHLFIMNNVHYIVQKVRGSSELREMIGDDYLKKLTGKFRQAATRYQRETWVKVLYYLRDEGLHASGGFSSGVSKSALRDRFKTFNSMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSYIESGRHPENYIKYSVEDLEYAVLDFFEGIPVSQHLRRRSE* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0077 667 MobiDBLite consensus disorder prediction 123 177 - -
Gso16g0077 667 Pfam Exo70 exocyst complex subunit 281 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso16g0077 667 Gene3D Exocyst complex component Exo70 46 156 - -
Gso16g0077 667 Gene3D Exocyst complex component Exo70 157 663 - -
Gso16g0077 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 35 156 IPR004140 GO:0000145|GO:0006887
Gso16g0077 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 168 666 IPR004140 GO:0000145|GO:0006887
Gso16g0077 667 SUPERFAMILY Cullin repeat-like 69 654 IPR016159 -
Gso16g0077 667 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 168 666 - -
Gso16g0077 667 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 35 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0077 Gso-Chr16 874109 877001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0077 39 667 EXO70 exocyst subunit family AT1G72470 67.512 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0077 K07195 - gmx:100812980 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0363 7 3424525 3427160 Gso16g0077 16 874109 877001 GST