Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0068 ATGAAAGCGCCAAATGCTTTGTTTGGTGCAAAACGCAGAAAATTTCAAGGGATTTTCAATGCTCTGTGTTCCATGGTTGTGCTTTTCTTCTTTTACAACCGGGAAGACATCATCAGCAACCCGATTCTCAGACAATCCTCGTACTTCACGAATCATGGGTTGCCTCAAAATGCGATTTTGAGAGATGGGTCTTCCTTGGTTCACCGTCGAATGGTGGAAATCAGCGCCAACACTTCAGGTGTAGCTGGTGAAAATGATTTAGGCGTAAGTAGTTCTGGATTATGTAGTGGGTTGGTTCAACATGATGGTTATTCTAGTCCCTGTGAATTCTTAAAGGTTAATCCACAGTGTTCTTCTGATGGGTATCTCGATTACTTGAAGTTTTTCTATTGTACATGTCTGGGTTTTAGTTTGTTTGGTTATCTAGTGTTGGGTGTGTGGCTGGCTGCTTTGTTTTATCTCTTGGGGAACACTGCTGCAGATTATTTTTGCCCTTCTCTTGAGCATCTGTCAAGGCTCTTGAAATTGCCTCCAACTGTGGCTGGGGTTGTGCTGCTTCCACTTGGGAATGGAGCACCTGATGTGTTTGCTAGCATAGCTGCTTTTGTGGGTGCTGAAAGTGGTGATGTAGGGCTTAACAGTGTGTTGGGTGGTGCTCTTTTTGTTACCACTATTGTTGCTGGAACTGTTTCGCTGTGTGTTGCGGATAAGGAGATTGGAATTGATCGAAGATGCTTTATAAGGGACGTGAGTTTCTTTCTCATCACTCTTGTTTCGCTGCTTTTGATTTTGTTTGTTGGGAAGGTGGGTGTCGGGGCGGCCATTGCCTTTGTGTCGATTTATATTGTGTATGCATTCATTGTTGCTGCCAACGAGATATTGCGGAAACATGCACGGAGGTTGAAATTGGATGCTGTCACACCAATGCTTCCTGTCCAGGGAAGTGTGTTCTCTCTAGGTTCGGAAGAGGATACTTCGATCTATAGCTCTTTACTGGAAGACACTGAGAGCGACCCCCCTCGCCTCCCTCCGTCGTTGCCACAGTGGATGTGGTCCTCAAATGTGGCAATATATTCAAACCAGGCAAATAAGATCAATTTTTTGGATGATGAAAGGCCTCCCTGGGGATGGAGTGATGGCTCCACGGAAAACACCAGGACATCGTTCACTGTATCAAAACTTTTTCTGATGATGGAGATTCCACTGGCAATTCCTAGGCGGCTAACAATTCCAATGGTTCATGAGGAAGTATGGTCAAAGCCTTATGCTGTGGCTAGTGCTTCATTAGCTCCTATTCTTCTAGCTATTTTGTGTAGCACCCAAGATAATGTGAGTAATCAGGGTGTTATACTTTCTTATTGTGTTGGTGTTACTCTTGGATGCACCTTTGGTATTCTTGCATATAAATACACAGTGTCTGATCATCCGCCTCCCCAATTCTTGCTTCCTTGGGTTCTGGGAGGATTCCTCATGAGTATAGTGTGGTTCTACATAATAGCAAATGAGCTTGTGGCTCTTTTGGTAGCGTTTGGTGTTATTTTCGGAATCAACCCATCCATCTTGGGGTTAACCGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATATTTCATTGGCATTGGATGGAGAAGATGGAGTTCAGATTGCCTTATCTGGATGCTATGCAGGTCCTATGTTCAACACACTTATTGGCTTGGGGATCTCGTTACTGCTTGGGGCTTGGTCAAAGAAACCCTCTTTGTATGTGGTGCCTGAAGACAGTAGCTTATTTTACACCATGGGATTTCTGATCACAGGACTGTTATGGGCACTTGTTGTTTTACCTCGGAACAACATGCATCCTAACAGAATATTAGGAATGGGTCTCATTGCCCTTTATTTGATATTTCTTTCTTTCAGGATGTGCACTGCTATGGGATTTATAACAATTGCTGGTTTAAGTTTAAGTTGA 1959 0.4354 MKAPNALFGAKRRKFQGIFNALCSMVVLFFFYNREDIISNPILRQSSYFTNHGLPQNAILRDGSSLVHRRMVEISANTSGVAGENDLGVSSSGLCSGLVQHDGYSSPCEFLKVNPQCSSDGYLDYLKFFYCTCLGFSLFGYLVLGVWLAALFYLLGNTAADYFCPSLEHLSRLLKLPPTVAGVVLLPLGNGAPDVFASIAAFVGAESGDVGLNSVLGGALFVTTIVAGTVSLCVADKEIGIDRRCFIRDVSFFLITLVSLLLILFVGKVGVGAAIAFVSIYIVYAFIVAANEILRKHARRLKLDAVTPMLPVQGSVFSLGSEEDTSIYSSLLEDTESDPPRLPPSLPQWMWSSNVAIYSNQANKINFLDDERPPWGWSDGSTENTRTSFTVSKLFLMMEIPLAIPRRLTIPMVHEEVWSKPYAVASASLAPILLAILCSTQDNVSNQGVILSYCVGVTLGCTFGILAYKYTVSDHPPPQFLLPWVLGGFLMSIVWFYIIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNISLALDGEDGVQIALSGCYAGPMFNTLIGLGISLLLGAWSKKPSLYVVPEDSSLFYTMGFLITGLLWALVVLPRNNMHPNRILGMGLIALYLIFLSFRMCTAMGFITIAGLSLS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0068 652 PANTHER CATION/CALCIUM EXCHANGER 4 10 645 - -
Gso16g0068 652 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 10 645 - -
Gso16g0068 652 Pfam Sodium/calcium exchanger protein 485 636 IPR004837 GO:0016021|GO:0055085
Gso16g0068 652 Pfam Sodium/calcium exchanger protein 146 288 IPR004837 GO:0016021|GO:0055085
Gso16g0068 652 Gene3D - 417 638 IPR044880 -
Gso16g0068 652 Gene3D - 176 308 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0068 Gso-Chr16 790110 792783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0068 85 644 Antiporters AT5G17860 42.705 8.47e-146 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0068 K13754 - gmx:100796101 1257.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0355 7 3347374 3350002 Gso16g0068 16 790110 792783 GST