Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0060 ATGATCATGGAACCAAATCCAACATCAGATCACAGTCTAGACTGGTTTGAAGGTTCTGTGTCTTACTTTCCACCACTCTTAGATTATCCATACGACTCTGGTGACATCCAAGACTATCAGTTGTGGGAACAAGACATAACCAGCCACTACCAAACTGATACCAATACCAGTTCTTCCCCTAATGCTACCAACATTTCTACAACCACAACACCCCTTGAGACTTGTGACTCTAATAACAACCTACCACTTTCTGATTTGCCAAAGAAAAGAAATGCCACTGATGAGTCTAGTCCCAAACCACCACAAAACCACAAGCACAAGAAAATCAAGAGCAAACCAATAAACAATGAAGCCTATACCGGACACGCAGAAGGGACAACAACAACAACAGTTAGAAAATCTGGTGGGAACAAGAAAGGGGGAGCTAAGGCCAATGGAAATAACTGCAACAACAAGGATGGTAGATGGGCAGAACAGTTGCTGAACCCTTGTGCTGCAGCCATAACAGGTGGAAACCTGAACCGTGTGCAACACCTCTCGTATGTTCTCCATGAGTTAGCATCACCTACTGGCGATGCTAACCACAGGCTTGCAGCACATGGTCTTAAAGCACTGACACAACATCTATCATCTTCTCCCTCTTCAGGGTCTATAACTTTTGCTTCCAGCGAGCCGCGGTTCTTCCAAAAGACACTCCTCAAGTTCTATGAGGTTAGCCCTTGGTTTTCCTTCCCTAACAACATAGCAAATGCTTCCATCCTTCAAGTTCTTGGCGAAGACACTGATAATAATTCACGCACCCTTCACATCCTTGACATTGGAGTCTCTCATGGAATGCAATGGCCAACTTTTCTTGAGGCCTTGAGTCGCAGACCTGGTGGACCTCCTCCGTTGGTTCGCCTCACCGTGGTCACTGCTTCTTCCTCCACTGAAAATGACACACCATTTTGTATTGGTCCTCCTGGTGATAACTTCTCTTCTAGACTCCTTGGTTTTGCTCAGTCAATGAATGTTAACTTGCAGATAAACAAACTAGATAACTGTCCATTGCATACTCTGAATGCTCAAAGTGTTGACACCTCCCCGGATGAAATCTTTGTTGTGTGTGCACAGTTTAGGTTGCATCAGTTGAATCACAATGCCCCTGATGAAAGGAGTGAGTTTCTGAAGGTGTTGAGAAACATGGAGCCCAAAGGGGTGATACTAAGTGACAACAACATGGGATGTTGTTGCAATTGTTGTGGGGATTTCACCACTGGATTCTCTCGGAGGGTGGAGTACTTGTGGAGGTTTTTGGACTCAACAAGCTCCGCGTTCAAGGGCCGGGAGAGCGACGAGAGGAGAGTGATGGAAGGTGAGGCTGCGAAGGCATTGACAAACCAGCGCGAGACGAATGAAGGGAAGGAGAAATGGTGTGAGAGAATGAAAGAAGCAGGGTTTGTGGGGGAAGTATTTGGAGAGGATGCAATAGATGGAGGTAGAGCTTTGCTGAGGAAGTATGATGGTAATTGGGAGATGAAAGTGGAAGATGACAATACAAGTGTTGGACTATGGTGGAAGGGGCAAAGTGTTTCTTTCTGTTCTTTGTGGAAGCTGGATGGGAATTATAAGACCTCAACATTTACATCATGA 1632 0.4547 MIMEPNPTSDHSLDWFEGSVSYFPPLLDYPYDSGDIQDYQLWEQDITSHYQTDTNTSSSPNATNISTTTTPLETCDSNNNLPLSDLPKKRNATDESSPKPPQNHKHKKIKSKPINNEAYTGHAEGTTTTTVRKSGGNKKGGAKANGNNCNNKDGRWAEQLLNPCAAAITGGNLNRVQHLSYVLHELASPTGDANHRLAAHGLKALTQHLSSSPSSGSITFASSEPRFFQKTLLKFYEVSPWFSFPNNIANASILQVLGEDTDNNSRTLHILDIGVSHGMQWPTFLEALSRRPGGPPPLVRLTVVTASSSTENDTPFCIGPPGDNFSSRLLGFAQSMNVNLQINKLDNCPLHTLNAQSVDTSPDEIFVVCAQFRLHQLNHNAPDERSEFLKVLRNMEPKGVILSDNNMGCCCNCCGDFTTGFSRRVEYLWRFLDSTSSAFKGRESDERRVMEGEAAKALTNQRETNEGKEKWCERMKEAGFVGEVFGEDAIDGGRALLRKYDGNWEMKVEDDNTSVGLWWKGQSVSFCSLWKLDGNYKTSTFTS* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0060 543 MobiDBLite consensus disorder prediction 120 146 - -
Gso16g0060 543 MobiDBLite consensus disorder prediction 51 86 - -
Gso16g0060 543 ProSiteProfiles GRAS family profile. 148 531 IPR005202 -
Gso16g0060 543 MobiDBLite consensus disorder prediction 51 146 - -
Gso16g0060 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 531 IPR005202 -
Gso16g0060 543 Pfam GRAS domain family 158 531 IPR005202 -
Gso16g0060 543 MobiDBLite consensus disorder prediction 88 102 - -
Gso16g0060 543 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 531 IPR030015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0060 Gso-Chr16 681975 684173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0060 1 531 GRAS Transcription Factor Family AT3G13840 49.632 1.80e-169 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso16g0060 GRAS 7.1e-72 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0060 - - gmx:100810818 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0346 7 3248456 3250676 Gso16g0060 16 681975 684173 GST
Gso16g0060 16 681975 684173 Gso15g0253 15 2296400 2298375 PCT
Gso16g0060 16 681975 684173 Gso11g3551 11 51294657 51296551 PCT