Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0052 | ATGGGTAGAAGTCGTTGTTGTTCCAAGGAAGGGTTGAACAAAGGAGCATGGACAGCTCTGGAAGATAGAATTTTGACAGAATACATTAACATTCATGGCGAAGGAAAATGGAGGCACTTGCCCAAAAGAGCAGGTCTTAAGAGATGTGGGAAAAGTTGCAGGCTAAGATGGTTGAATTATCTGAGACCTGGCATTAAAAGAGGCAACATTACTAATGATGAAGAGGAGCTTATAATTAGGCTTCACAATCTTCTTGGAAACAGGTGGTCTTTGATTGCTGGACGGCTTCCAGGACGAACAGACAATGAAATCAAGAATTATTGGAACACCAACATTGGGAGGAAACTTCAAAATGGTGGTGCAGGAACCACTTTAAACACACTTCAACAAGAAGATCAAAACGTTAAAGAACAAGAGTGGCACTATGATAAGGGTTCGTGTCTTGTTCAGACAAAAGCAACAAGGTGGACTAAGGTCACAGTCACCAATGAAATTAGTCAACCCAATGAAGGGATTACAATTAAGAGCAATGTTGGTGATAACAAAATGAAGGGTTTTCTAGTGTCTCCATCTAAAGAGAGTAACAATGATTCAGTGTTGTTGGATTTCATGGCAGATTTTGAGATGGATGGAAACTTCTTCTCGGAGCTCCTTAAGATGGATTTGCCCGAATCATCTTGTAAGGAAAATAAGATACTCGGAGATAATGGTAACCCTAGCACGGTTGATAAAGTCTATTTATCTCCAAAATCATCCTGTGATACCGCCCACTTCCCTTGGGGTGATTCATTCTATGATACAAATTTTGATTTTCTACCAGTGACAATTTTTATGGAGTCCGGATTTGATTGGCTCTGA | 858 | 0.4009 | MGRSRCCSKEGLNKGAWTALEDRILTEYINIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPGIKRGNITNDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNGGAGTTLNTLQQEDQNVKEQEWHYDKGSCLVQTKATRWTKVTVTNEISQPNEGITIKSNVGDNKMKGFLVSPSKESNNDSVLLDFMADFEMDGNFFSELLKMDLPESSCKENKILGDNGNPSTVDKVYLSPKSSCDTAHFPWGDSFYDTNFDFLPVTIFMESGFDWL* | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0052 | 285 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 1 | 238 | - | - | |
Gso16g0052 | 285 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Gso16g0052 | 285 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Gso16g0052 | 285 | Pfam | Myb-like DNA-binding domain | 67 | 110 | IPR001005 | - | |
Gso16g0052 | 285 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Gso16g0052 | 285 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Gso16g0052 | 285 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Gso16g0052 | 285 | CDD | SANT | 71 | 112 | IPR001005 | - | |
Gso16g0052 | 285 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
Gso16g0052 | 285 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 1 | 238 | - | - | |
Gso16g0052 | 285 | Gene3D | - | 70 | 144 | - | - | |
Gso16g0052 | 285 | SMART | sant | 13 | 63 | IPR001005 | - | |
Gso16g0052 | 285 | SMART | sant | 66 | 114 | IPR001005 | - | |
Gso16g0052 | 285 | Gene3D | - | 14 | 66 | - | - | |
Gso16g0052 | 285 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0052 | Gso-Chr16 | 607995 | 609454 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0052 | 1 | 131 | MYB Transcription Factor Family | AT4G38620 | 70.229 | 7.20e-60 | 190 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gso16g0052 | Myb_DNA-binding | 8.8e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0052 | K09422 | - | gmx:100809225 | 602.438 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0333 | 7 | 3146102 | 3153978 | Gso16g0052 | 16 | 607995 | 609454 | GST |