Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0045 ATGGCTTTCCAAGTTTCTCATAAAATCAAATATGTTGCATTTCTTTGTCTCTTGCTTGCAAGGATAGACAATAATTCATCGTATCTAGTGACATCTTTTACTTTTCTCAACGACACTCCTCAAATAAAGTACGATGTCTTTGTTAGCTTTAGAGGAGCAGACATTCGCCAAGGTTTCCTTAGCCATTTGATTGAGGCATTTTCTCGAAAGCATATTGCTGCCTTTGTAGATCACAACATTCTCAAAGGAGATGAACTGTCTGAAACACTTCTTGGAGCCATTAATGGATCATTGATTTCATTGATTATATTTTCACAAAATTATGCTTCTTCACGTTGGTGTCTGTTAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAGGGATGGACAAATTGTAGTGCCTGTTTTCTATAAAGTAGATCCTTCAGATGTACGACATCAAAAGGGGACTTATGGAGATGCCTTTGCTAAACATGAAGGAAAATTTAGTTTGACTACTATACAAACTTGGAGATCTGCTTTGAATGAATCTGCTAACCTATCAGGATTCCATTCATCAACTTTTGGGGATGAAGCTGAGCTTGTCAAAGAGATAGTTAAATGTGTGTGGATGAGGTTGAATCATGCGCACCAAGTTAACTCCAAAGGGCTTGTTGGAGTTGGTAAACGAATTGTACATGTAGAATCATTGCTGCAATTAGAAGCCGCGGATGTTCGTATTATTGGAATCTGGGGCATAGGTGGTATTGGTAAGACAACCATTGCACAAGAAGTTTATAATAAACTCTGTTTTGAATATGAAGGTTGCTGTTTTTTGGCTAACATAAGGGAAGAGTCAGGAAGACATGGAATAATCTCATTAAAGAAAAATCTTTTTTCAACATTATTAGGAGAGGAATATTTGAAAATTGACACACCTAATGGATTGCCTCAATATGTTGAGAGAAGGCTTCATCGTATGAAGGTTCTTATCATTCTTGATGATGTCAATGACTCAGAGCAACTAGAAACTTTAGCTAGAACAGATTGGTTTGGACCGGGTAGTAGAATAATCGTGACAACTAGAGATAGACAGGTGCTTGCTAATGAGTTTGCTAATATATACGAGGTTGAGCCATTAAACTTTGATGAATCTTTATGGCTTTTCAATTTGAACGTCTTTAAGCAAAAACATCCTGAAATAGAGTACTATGAGCTATCAAAGAAAGTTGTCGATTATGCCAAAGGCATTCCGTTTGTTCTTAAACTTTTGGGTCACCGTCTTCATGGAAAAGAGAAAGAGATATGGGAAAGCCAATTAGAAGGACAAAATGTGCAAACCAAAAAGGTTCATGATATTATTAAATTGAGTTATAATGATCTTGATCAGGATGAAAAGAAGATACTTATGGATATTGCATGTTTTTTCTATGGGCTGCGTCTAGAAGTTAAGAGGATAAAACTTTTATTGAAAGATCATGATTATTCAGTGGCTTCGGGATTAGAAAGATTGAAGGATAAAGCTCTTATCAGTATTTCTAAAGAAAATATGGTATCAATGCATGACATTATAAAAGAAACTGCTTGGCAGATTGCTCCCCAGGAATCTATTGAAGACCCTAGAAGCCAAATTCGACTATTTGATCCTGATGATGTCTATCAAGTACTAAAATACAACAAGGGTAACGAGGCTATCAGAAGCATAGTCGTCAACTTGTTGAGAATGAAGCAATTGCGATTAAACCCTCAAGTATTTACTAAGATGAACAAGCTCCATTTTCTAAATTTTTATAGTGTATGGTCCAGCAGTACTTTCCTCCAGGATCCATGGGGCTTGTATCTTTCTCAAGGGCTTGAATCTTTGCCAAATGAACTAAGATATCTTAGGTGGACGCATTACCCCTTGGAATCTTTGCCTTCAAAGTTTTCTGCAGAAAATCTTGTTGAGTTGCACTTGCCATATAGCCGTGTGAAAAAACTTTGGCTAAAAGTACCGGATCTTGTGAATTTAAAGGTCCTTAAACTGCATTCATCAGCACATGTAAAGGAGCTGCCAGACTTATCAACGGCCACAAATCTTGAAATAATAGGTCTCCGATTCTGTGTAGGGTTGACTAGAGTGCATCCATCAGTTTTCTCTCTCAAAAAGCTTGAGAAATTGGATTTAGGTGGATGCACTTCCCTTACAAGCCTTCGAAGCAATATCCATATGCAATCCCTTCGCTATCTCTCCCTTCATGGCTGCTTAGAACTAAAGGATTTCTCTGTGATCTCAAAGAATCTGGTAAAGTTGAATTTAGAACTAACTAGTATCAAACAATTGCCTTTATCTATTGGATCTCAAAGCATGCTTAAGATGCTACGTCTAGCATACACTTATATCGAGACCTTGCCAACAAGCATCAAGCATCTTACAAGGCTGCGACATCTAGATCTTCGATATTGCGCGGGGCTTCGGACTCTACCAGAGCTTCCCCCATCACTTGAAACACTAGATGTCCGCGAATGCGTGTCATTGGAGACTGTAATGTTCCCTTCTATTCCTCAACAAAGGAAGGAAAATAAGAAAAAAGTTTGCTTCTGGAACTGCTTGCAATTGGATGAATATTCTCTCATGGCCATTGAGATGAATGCGCAAATTAACATGGTGAAATTTGCACACCAACATTTATCTACATTTCGTGATGCTCAAGGTACATACGTGTATCCGGGAAGTGATGTTCCGCAATGGTTGGACCATAAGACAAGACATGGTTATGATGATGATTATGTAACTATTGCTCCACATTCCTCTCACTTGGGCTTCATTTTTGGCTTTATTGTTCCAGAAGTCCCCTATGGGGGTTCCAATTTGAAACTCAAAATCACCACTGGGGCTGAAGGTGAAGAAGGTAACAGTATCATTGTGTACTTGGAAAGACCACATCATGGTATTAAATCGAATCATGTGTATCTAATGTACGACCAAGCATGTTCTCACTTTCTGAATAGTCGTGCCAAACATCATCCAATGTTGAAAATTAAGGTTACAGTCGCATCACAAACGCTCACATCACAATACGTACCGTTGCAAATTAGAGGGTTTGGGGTCAGCACAATCAACAGTTTTCCTCAAATAGAAGAATTGGTTTATAGTAGTTCAAAGGAAAATTCTGACGTCTACCCTGTTTCCGTGTGGAATGGGTGA 3165 0.382 MAFQVSHKIKYVAFLCLLLARIDNNSSYLVTSFTFLNDTPQIKYDVFVSFRGADIRQGFLSHLIEAFSRKHIAAFVDHNILKGDELSETLLGAINGSLISLIIFSQNYASSRWCLLELVKIVECRKRDGQIVVPVFYKVDPSDVRHQKGTYGDAFAKHEGKFSLTTIQTWRSALNESANLSGFHSSTFGDEAELVKEIVKCVWMRLNHAHQVNSKGLVGVGKRIVHVESLLQLEAADVRIIGIWGIGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIISLKKNLFSTLLGEEYLKIDTPNGLPQYVERRLHRMKVLIILDDVNDSEQLETLARTDWFGPGSRIIVTTRDRQVLANEFANIYEVEPLNFDESLWLFNLNVFKQKHPEIEYYELSKKVVDYAKGIPFVLKLLGHRLHGKEKEIWESQLEGQNVQTKKVHDIIKLSYNDLDQDEKKILMDIACFFYGLRLEVKRIKLLLKDHDYSVASGLERLKDKALISISKENMVSMHDIIKETAWQIAPQESIEDPRSQIRLFDPDDVYQVLKYNKGNEAIRSIVVNLLRMKQLRLNPQVFTKMNKLHFLNFYSVWSSSTFLQDPWGLYLSQGLESLPNELRYLRWTHYPLESLPSKFSAENLVELHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHPSVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVISKNLVKLNLELTSIKQLPLSIGSQSMLKMLRLAYTYIETLPTSIKHLTRLRHLDLRYCAGLRTLPELPPSLETLDVRECVSLETVMFPSIPQQRKENKKKVCFWNCLQLDEYSLMAIEMNAQINMVKFAHQHLSTFRDAQGTYVYPGSDVPQWLDHKTRHGYDDDYVTIAPHSSHLGFIFGFIVPEVPYGGSNLKLKITTGAEGEEGNSIIVYLERPHHGIKSNHVYLMYDQACSHFLNSRAKHHPMLKIKVTVASQTLTSQYVPLQIRGFGVSTINSFPQIEELVYSSSKENSDVYPVSVWNG* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0045 1054 Pfam NB-ARC domain 230 451 IPR002182 GO:0043531
Gso16g0045 1054 Gene3D Ribonuclease Inhibitor 745 835 IPR032675 -
Gso16g0045 1054 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 32 1049 - -
Gso16g0045 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 465 IPR027417 -
Gso16g0045 1054 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 183 IPR035897 -
Gso16g0045 1054 SUPERFAMILY "Winged helix" DNA-binding domain 441 550 IPR036390 -
Gso16g0045 1054 SMART till_3 43 180 IPR000157 GO:0007165
Gso16g0045 1054 Gene3D - 373 455 IPR042197 -
Gso16g0045 1054 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 1049 IPR044974 GO:0006952
Gso16g0045 1054 SUPERFAMILY L domain-like 562 856 - -
Gso16g0045 1054 Gene3D Ribonuclease Inhibitor 549 744 IPR032675 -
Gso16g0045 1054 Pfam TIR domain 43 214 IPR000157 GO:0007165
Gso16g0045 1054 Gene3D - 211 367 IPR027417 -
Gso16g0045 1054 Gene3D - 41 210 IPR035897 -
Gso16g0045 1054 PRINTS Disease resistance protein signature 240 255 - -
Gso16g0045 1054 PRINTS Disease resistance protein signature 316 330 - -
Gso16g0045 1054 PRINTS Disease resistance protein signature 407 421 - -
Gso16g0045 1054 PRINTS Disease resistance protein signature 705 721 - -
Gso16g0045 1054 ProSiteProfiles TIR domain profile. 42 206 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0045 Gso-Chr16 529056 533858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0045 44 816 WRKY Transcription Factor Family AT4G12020 34.097 2.13e-113 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0045 - - gmx:100778934 2092.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0324 7 3047772 3053348 Gso16g0045 16 529056 533858 GST