Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0045 | ATGGCTTTCCAAGTTTCTCATAAAATCAAATATGTTGCATTTCTTTGTCTCTTGCTTGCAAGGATAGACAATAATTCATCGTATCTAGTGACATCTTTTACTTTTCTCAACGACACTCCTCAAATAAAGTACGATGTCTTTGTTAGCTTTAGAGGAGCAGACATTCGCCAAGGTTTCCTTAGCCATTTGATTGAGGCATTTTCTCGAAAGCATATTGCTGCCTTTGTAGATCACAACATTCTCAAAGGAGATGAACTGTCTGAAACACTTCTTGGAGCCATTAATGGATCATTGATTTCATTGATTATATTTTCACAAAATTATGCTTCTTCACGTTGGTGTCTGTTAGAACTTGTGAAAATTGTTGAGTGCAGAAAAAGGGATGGACAAATTGTAGTGCCTGTTTTCTATAAAGTAGATCCTTCAGATGTACGACATCAAAAGGGGACTTATGGAGATGCCTTTGCTAAACATGAAGGAAAATTTAGTTTGACTACTATACAAACTTGGAGATCTGCTTTGAATGAATCTGCTAACCTATCAGGATTCCATTCATCAACTTTTGGGGATGAAGCTGAGCTTGTCAAAGAGATAGTTAAATGTGTGTGGATGAGGTTGAATCATGCGCACCAAGTTAACTCCAAAGGGCTTGTTGGAGTTGGTAAACGAATTGTACATGTAGAATCATTGCTGCAATTAGAAGCCGCGGATGTTCGTATTATTGGAATCTGGGGCATAGGTGGTATTGGTAAGACAACCATTGCACAAGAAGTTTATAATAAACTCTGTTTTGAATATGAAGGTTGCTGTTTTTTGGCTAACATAAGGGAAGAGTCAGGAAGACATGGAATAATCTCATTAAAGAAAAATCTTTTTTCAACATTATTAGGAGAGGAATATTTGAAAATTGACACACCTAATGGATTGCCTCAATATGTTGAGAGAAGGCTTCATCGTATGAAGGTTCTTATCATTCTTGATGATGTCAATGACTCAGAGCAACTAGAAACTTTAGCTAGAACAGATTGGTTTGGACCGGGTAGTAGAATAATCGTGACAACTAGAGATAGACAGGTGCTTGCTAATGAGTTTGCTAATATATACGAGGTTGAGCCATTAAACTTTGATGAATCTTTATGGCTTTTCAATTTGAACGTCTTTAAGCAAAAACATCCTGAAATAGAGTACTATGAGCTATCAAAGAAAGTTGTCGATTATGCCAAAGGCATTCCGTTTGTTCTTAAACTTTTGGGTCACCGTCTTCATGGAAAAGAGAAAGAGATATGGGAAAGCCAATTAGAAGGACAAAATGTGCAAACCAAAAAGGTTCATGATATTATTAAATTGAGTTATAATGATCTTGATCAGGATGAAAAGAAGATACTTATGGATATTGCATGTTTTTTCTATGGGCTGCGTCTAGAAGTTAAGAGGATAAAACTTTTATTGAAAGATCATGATTATTCAGTGGCTTCGGGATTAGAAAGATTGAAGGATAAAGCTCTTATCAGTATTTCTAAAGAAAATATGGTATCAATGCATGACATTATAAAAGAAACTGCTTGGCAGATTGCTCCCCAGGAATCTATTGAAGACCCTAGAAGCCAAATTCGACTATTTGATCCTGATGATGTCTATCAAGTACTAAAATACAACAAGGGTAACGAGGCTATCAGAAGCATAGTCGTCAACTTGTTGAGAATGAAGCAATTGCGATTAAACCCTCAAGTATTTACTAAGATGAACAAGCTCCATTTTCTAAATTTTTATAGTGTATGGTCCAGCAGTACTTTCCTCCAGGATCCATGGGGCTTGTATCTTTCTCAAGGGCTTGAATCTTTGCCAAATGAACTAAGATATCTTAGGTGGACGCATTACCCCTTGGAATCTTTGCCTTCAAAGTTTTCTGCAGAAAATCTTGTTGAGTTGCACTTGCCATATAGCCGTGTGAAAAAACTTTGGCTAAAAGTACCGGATCTTGTGAATTTAAAGGTCCTTAAACTGCATTCATCAGCACATGTAAAGGAGCTGCCAGACTTATCAACGGCCACAAATCTTGAAATAATAGGTCTCCGATTCTGTGTAGGGTTGACTAGAGTGCATCCATCAGTTTTCTCTCTCAAAAAGCTTGAGAAATTGGATTTAGGTGGATGCACTTCCCTTACAAGCCTTCGAAGCAATATCCATATGCAATCCCTTCGCTATCTCTCCCTTCATGGCTGCTTAGAACTAAAGGATTTCTCTGTGATCTCAAAGAATCTGGTAAAGTTGAATTTAGAACTAACTAGTATCAAACAATTGCCTTTATCTATTGGATCTCAAAGCATGCTTAAGATGCTACGTCTAGCATACACTTATATCGAGACCTTGCCAACAAGCATCAAGCATCTTACAAGGCTGCGACATCTAGATCTTCGATATTGCGCGGGGCTTCGGACTCTACCAGAGCTTCCCCCATCACTTGAAACACTAGATGTCCGCGAATGCGTGTCATTGGAGACTGTAATGTTCCCTTCTATTCCTCAACAAAGGAAGGAAAATAAGAAAAAAGTTTGCTTCTGGAACTGCTTGCAATTGGATGAATATTCTCTCATGGCCATTGAGATGAATGCGCAAATTAACATGGTGAAATTTGCACACCAACATTTATCTACATTTCGTGATGCTCAAGGTACATACGTGTATCCGGGAAGTGATGTTCCGCAATGGTTGGACCATAAGACAAGACATGGTTATGATGATGATTATGTAACTATTGCTCCACATTCCTCTCACTTGGGCTTCATTTTTGGCTTTATTGTTCCAGAAGTCCCCTATGGGGGTTCCAATTTGAAACTCAAAATCACCACTGGGGCTGAAGGTGAAGAAGGTAACAGTATCATTGTGTACTTGGAAAGACCACATCATGGTATTAAATCGAATCATGTGTATCTAATGTACGACCAAGCATGTTCTCACTTTCTGAATAGTCGTGCCAAACATCATCCAATGTTGAAAATTAAGGTTACAGTCGCATCACAAACGCTCACATCACAATACGTACCGTTGCAAATTAGAGGGTTTGGGGTCAGCACAATCAACAGTTTTCCTCAAATAGAAGAATTGGTTTATAGTAGTTCAAAGGAAAATTCTGACGTCTACCCTGTTTCCGTGTGGAATGGGTGA | 3165 | 0.382 | MAFQVSHKIKYVAFLCLLLARIDNNSSYLVTSFTFLNDTPQIKYDVFVSFRGADIRQGFLSHLIEAFSRKHIAAFVDHNILKGDELSETLLGAINGSLISLIIFSQNYASSRWCLLELVKIVECRKRDGQIVVPVFYKVDPSDVRHQKGTYGDAFAKHEGKFSLTTIQTWRSALNESANLSGFHSSTFGDEAELVKEIVKCVWMRLNHAHQVNSKGLVGVGKRIVHVESLLQLEAADVRIIGIWGIGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIISLKKNLFSTLLGEEYLKIDTPNGLPQYVERRLHRMKVLIILDDVNDSEQLETLARTDWFGPGSRIIVTTRDRQVLANEFANIYEVEPLNFDESLWLFNLNVFKQKHPEIEYYELSKKVVDYAKGIPFVLKLLGHRLHGKEKEIWESQLEGQNVQTKKVHDIIKLSYNDLDQDEKKILMDIACFFYGLRLEVKRIKLLLKDHDYSVASGLERLKDKALISISKENMVSMHDIIKETAWQIAPQESIEDPRSQIRLFDPDDVYQVLKYNKGNEAIRSIVVNLLRMKQLRLNPQVFTKMNKLHFLNFYSVWSSSTFLQDPWGLYLSQGLESLPNELRYLRWTHYPLESLPSKFSAENLVELHLPYSRVKKLWLKVPDLVNLKVLKLHSSAHVKELPDLSTATNLEIIGLRFCVGLTRVHPSVFSLKKLEKLDLGGCTSLTSLRSNIHMQSLRYLSLHGCLELKDFSVISKNLVKLNLELTSIKQLPLSIGSQSMLKMLRLAYTYIETLPTSIKHLTRLRHLDLRYCAGLRTLPELPPSLETLDVRECVSLETVMFPSIPQQRKENKKKVCFWNCLQLDEYSLMAIEMNAQINMVKFAHQHLSTFRDAQGTYVYPGSDVPQWLDHKTRHGYDDDYVTIAPHSSHLGFIFGFIVPEVPYGGSNLKLKITTGAEGEEGNSIIVYLERPHHGIKSNHVYLMYDQACSHFLNSRAKHHPMLKIKVTVASQTLTSQYVPLQIRGFGVSTINSFPQIEELVYSSSKENSDVYPVSVWNG* | 1055 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0045 | 1054 | Pfam | NB-ARC domain | 230 | 451 | IPR002182 | GO:0043531 | |
Gso16g0045 | 1054 | Gene3D | Ribonuclease Inhibitor | 745 | 835 | IPR032675 | - | |
Gso16g0045 | 1054 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 32 | 1049 | - | - | |
Gso16g0045 | 1054 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 205 | 465 | IPR027417 | - | |
Gso16g0045 | 1054 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 39 | 183 | IPR035897 | - | |
Gso16g0045 | 1054 | SUPERFAMILY | "Winged helix" DNA-binding domain | 441 | 550 | IPR036390 | - | |
Gso16g0045 | 1054 | SMART | till_3 | 43 | 180 | IPR000157 | GO:0007165 | |
Gso16g0045 | 1054 | Gene3D | - | 373 | 455 | IPR042197 | - | |
Gso16g0045 | 1054 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 32 | 1049 | IPR044974 | GO:0006952 | |
Gso16g0045 | 1054 | SUPERFAMILY | L domain-like | 562 | 856 | - | - | |
Gso16g0045 | 1054 | Gene3D | Ribonuclease Inhibitor | 549 | 744 | IPR032675 | - | |
Gso16g0045 | 1054 | Pfam | TIR domain | 43 | 214 | IPR000157 | GO:0007165 | |
Gso16g0045 | 1054 | Gene3D | - | 211 | 367 | IPR027417 | - | |
Gso16g0045 | 1054 | Gene3D | - | 41 | 210 | IPR035897 | - | |
Gso16g0045 | 1054 | PRINTS | Disease resistance protein signature | 240 | 255 | - | - | |
Gso16g0045 | 1054 | PRINTS | Disease resistance protein signature | 316 | 330 | - | - | |
Gso16g0045 | 1054 | PRINTS | Disease resistance protein signature | 407 | 421 | - | - | |
Gso16g0045 | 1054 | PRINTS | Disease resistance protein signature | 705 | 721 | - | - | |
Gso16g0045 | 1054 | ProSiteProfiles | TIR domain profile. | 42 | 206 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0045 | Gso-Chr16 | 529056 | 533858 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0045 | 44 | 816 | WRKY Transcription Factor Family | AT4G12020 | 34.097 | 2.13e-113 | 385 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0045 | - | - | gmx:100778934 | 2092.39 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0324 | 7 | 3047772 | 3053348 | Gso16g0045 | 16 | 529056 | 533858 | GST |