Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2263 ATGCTATCTTCAAATGTTGTTCCATCATCATCCCCTGTCACTTTCTCCAAACCCAATCACCATTTTTTCATCAATGCATCTCCCAATCCCAAACCAAATCTTCTCAGGTTTCAGGCCCAACACAGAGCCACTCCTCTCAAAAGTTCCAAACTTTCTTTTATGCCAACGTCTCAGATCCAACATTCAATCGCAAAGTTAGGCTCTTTCAGCAGATTCCTCTCACACCCTTTTGAGCTCTCATCAAAACCCAGATACCAAATCGTTAAGGCTGCATCAGAAGCCAATCCTGAAGGAGAAAATGTAGCCCCCACTGAACCTAATTCTAAAAATCTCAAACTTGGTCTTGTGTTTGGGCTATGGTACTTCCAAAACATTGTGTTCAACATTTACAACAAAAAAGTGTTGAACATATTCCCTTTCCCATGGCTTCTTGCATCTTTTCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTTTGGTCCTTGAAGCTCCAACCTTGTCCAAAAATCTCAAAACCCTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATATCAGCCTGTGTTTCATTCTCCAAGGTTGCTGTTTCCTTTACACATGTCATCAAATCTGCAGAACCAGTTTTCTCTGTCATGTTTTCTTCAGTCCTTGGAGATAAGTACCCCATTCAGGTTTGGCTTTCAATTCTGCCCATTGTGCTTGGTTGTTCTTTAGCTGCTGTTACTGAGGTTTCTTTCAATGTACAAGGATTGTGGTGTGCCCTTATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAAAGAAGTCTACAGAATTTCAAGGAAGTTGATGGCTTGAACTTGTATGGATGGATTACCATACTTTCATTGCTTTATCTGTTTCCAGTGGCTATTTTTGTAGAAGGGTCTCAGTGGATCCCAGGGTATTACAAGGCAATTGAAGCTATTGGCAAAGCATCCACATTTTATACTTGGGTGTTGGTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCACTTGATGAAATTAGCCCATTGACTTTCTCTGTGGGGAACACAATGAAAAGAGTGGTGGTGATTGTGTCTTCGGTTTTGGTGTTCAGGAATCCGGTTCGGCCTCTTAATGGCCTTGGATCTGCCATTGCAATTCTTGGGACTTTCCTGTATTCTCAGGCAACATCCAAAAAGAAAGCAATGAAAATTGAAGGTGAAAAGAGTAGTTAG 1257 0.4161 MLSSNVVPSSSPVTFSKPNHHFFINASPNPKPNLLRFQAQHRATPLKSSKLSFMPTSQIQHSIAKLGSFSRFLSHPFELSSKPRYQIVKAASEANPEGENVAPTEPNSKNLKLGLVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVMFSSVLGDKYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWCALISNVGFVLRNIYSKRSLQNFKEVDGLNLYGWITILSLLYLFPVAIFVEGSQWIPGYYKAIEAIGKASTFYTWVLVSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVLVFRNPVRPLNGLGSAIAILGTFLYSQATSKKKAMKIEGEKSS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2263 418 Pfam Triose-phosphate Transporter family 111 401 IPR004853 -
Gso15g2263 418 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 43 413 - -
Gso15g2263 418 PANTHER SOLUTE CARRIER FAMILY 35 43 413 - -
Gso15g2263 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 403 - -
Gso15g2263 418 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 111 409 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2263 Gso-Chr15 51554368 51556115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2263 29 416 Antiporters AT5G17630 73.282 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2263 K15283 - gmx:100101869 818.15