Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2243 ATGGCTCAGAAAACCGAGAAAGAAGAAACCGACTTCAAAGTTCCGGAAACGATTACGCTTTGCGTCAACAACTGCGGCGTCACCGGAAACCCTGCCACGAATAACATGTGTCAGAAGTGCTTCACTGCCTCTACCGCCACCACTTCCGGCGCCGGAGGTGCCGGAATAGCTTCTCCGGCGACCAGATCCGGCGTCTCCGCGCGTCCTCAGAAGAGATCTTTTCCTGAAGAGCCCTCGCCGGTGGCGGATCCTCCTTCTTCGGACCAGACGACGCCGTCGGAGGCGAAGCGCGTGGTCAACCGCTGCTCCGGATGCCGGCGGAAGGTCGGACTCACCGGATTCCGGTGCCGGTGCGGCGAGCTCTTCTGCGCCGAGCACCGGTACTCCGACCGCCACGACTGCAGCTATGACTACAAAGCCGCCGGAAGAGAAGCCATCGCGAGGGAGAATCCGGTGATCAGAGCTGCGAAGATCGTCAAAGTCTGA 486 0.6049 MAQKTEKEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFTASTATTSGAGGAGIASPATRSGVSARPQKRSFPEEPSPVADPPSSDQTTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVIRAAKIVKV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2243 161 SUPERFAMILY AN1-like Zinc finger 87 155 IPR035896 -
Gso15g2243 161 SMART AN1_Zf_4 102 139 IPR000058 GO:0008270
Gso15g2243 161 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Gso15g2243 161 Gene3D - 1 70 - -
Gso15g2243 161 Gene3D - 77 157 IPR035896 -
Gso15g2243 161 MobiDBLite consensus disorder prediction 48 95 - -
Gso15g2243 161 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Gso15g2243 161 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 161 - -
Gso15g2243 161 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 1 161 - -
Gso15g2243 161 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Gso15g2243 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 50 - -
Gso15g2243 161 Pfam AN1-like Zinc finger 102 139 IPR000058 GO:0008270
Gso15g2243 161 ProSiteProfiles Zinc finger AN1-type profile. 96 142 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2243 Gso-Chr15 51129757 51131108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2243 8 161 C2H2 Transcription Factor Family AT3G52800 36.994 4.45e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2243 - - gmx:100787293 321.627