Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2242 ATGGAATTGGAGTTCGTAGCTTTGGAGTTGGCTGATCCCATGAAGAAGGTTCATATGGGTAAGAACAAGTCACTTAACCGCAGAGCACATTGTTGCTGGAATCAATGGCAAGCATATGTCTTCTCTTCTTCTTCTATTCTCGAGCTCGACTTGGTCACAATTTGCCGGAGCGGAAAAAGAGCTTTGAGCCCTGCTGTCGGCAAAATGTCCCTCCCTTACATCTTCGGCATCGGCCTCGCCCTAATCCTTCGCAAGACCGTTGCCGGAATCAACGAATTTGGTTTCTCGTGGTTCCTCATCTTCATGGGAGTCACGATTTTCATCATACCCTTCCCCGTCCTAGCATGCATCCTAACTGAGCTCAAGTTCCTCACTCCTCGCGTCGGCGACACTGCCATGGCCGTCGCAGCGTTCAACGATGTTGATGCATGGATCCTCCTTGCCCTTGCCATTGCACTCGCCGCCGTCGACGTCAACAGCCACATTCACAAGAGCCCCTTCGTCTCGCTACGAGTGCTCCTCTCCAGCATGGCCTTTGTTGCCTTCATGATGATAATAATTTGGCTAGGAGACTTGACCAAACCGCTTCGGGAAAATTTGAAAGCGAAGATGGATGGAAGTGGGAATCAGTAG 633 0.5055 MELEFVALELADPMKKVHMGKNKSLNRRAHCCWNQWQAYVFSSSSILELDLVTICRSGKRALSPAVGKMSLPYIFGIGLALILRKTVAGINEFGFSWFLIFMGVTIFIIPFPVLACILTELKFLTPRVGDTAMAVAAFNDVDAWILLALAIALAAVDVNSHIHKSPFVSLRVLLSSMAFVAFMMIIIWLGDLTKPLRENLKAKMDGSGNQ* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2242 210 Gene3D - 44 207 IPR038770 -
Gso15g2242 210 PANTHER CATION/H+ EXCHANGER 3 47 187 - -
Gso15g2242 210 Pfam Sodium/hydrogen exchanger family 47 192 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso15g2242 210 PANTHER CATION/H + ANTIPORTER 47 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2242 Gso-Chr15 51109636 51112221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2242 47 190 Antiporter Super Family AT4G23700 46.528 1.25e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2242 - - gmx:102670539 398.282