Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2224 ATGCGTATGGAAAACCACCAAAATCACAAGGTAGAATCAGAACCGGACATAGAGAAGAACCACCATCACCGCCACCAACAGCAGCAGCAGCAACAACACCGTAACGAAGTGTGGGGCACGTGGGAGGAGCTGTTGCTAGCGTGCGCCGTGAACCGCCATGGCTTCAAGGACTGGGACGCCGTCGCCATGGAGGTCCAGTCGCGCACCACGCGCCTCCTCGCCACCGCGCACCACTGCGAGCAGAAATTTGACGATCTCAGCCGCCGATTCGCCGACCAATGCAACGACGACGTTCCGCCGTCGCGCCAGAACGGCGGCGCCGCTGCTATCTCCGATCACGTCCCCTGGCTCGACGAATTGCGAAAACTCCGCGTCGCCGAGCTCCGCCGCGAGGTCCAACGCAGCGACGTTTCCATCCTGTCGTTGCAGTTGGAGGTGAAGAGGTTAGAGGAGGAGAAAACGAAGGAGAAAGACGGAAAGGACGACAAGAAACCAGATCTGGCGGTTTCCGGCGAGTTGCGGCCGGAAAACGACAAAACCGGCGGGGAAGTTGACGAGGCTGGACCGGCGAATTCTGAACCGGAGGAGAGAACCGCAAACAACACAGACAAGACGTTGCCAACCATGGGCGACGAATCGGACCGGGAGAACCAATCGGTTAACGAATCCAACTCGACCGGTTCGCGGTTCGAGAAAACCGGAGACGGCGACGCGAAGGCAGGAACCGGACCGGCTCCGGTTCAAACCGGTTCGCTTGAACCGGATCCGGTCTTGCGGAAGGGAAAACCGGTTGGAGAGGAATCGAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGCGAGTCGGTGCCTCCGAGTGAAGAGAGAAAAGTGGAGGAGGATGATAACTCGTCCGAGTTACATGACTCGGTGGCTCACTCGGGCGAGGGAGGGACGAGGGAGAGCAGCGAGGTGCAGAGCTCCGCGAGCTTGACGAGGAAGAGGAAGACACGGCGGAGGAAGGAGGTTTCCGGCGGCGGTGGCGCCTCATCTCCGGCGGAGAACGACGAGTTGGCAACGGTGAAATCAGAACCGTTGGTTGGGGTTTTGGAGTTGATCAAGGGGCACGAGCACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGCAGGATACCGATAGATACAAAGACCTAGTGAAACAGCCCATGGACTTAGAAACCATACAATTGAGACTCCAAAAGGGTCACTATTCCTCATGCACCAGTGCATTCTTCCGCGACCTCCTCCTCCTCTTCACCAACGCCACCGTGTTCTTCTCCCATGACACCCTGGAATCACAGGTAGGGCGGCAGCTGCACCGCCTTGCCACCACGGAGATGAAGAACCACGGCCAAGCACAATCCGATCCTATCCCCCGGAAGAACGATTCACTCCCACCAAATGCATCATTAGCTAAACCAGATTCTCTCATTTCCAAGAACAAAGCCTCTGGTCCTATATTGGTATGCCGCAAACGCAGTTCAATGTTAGCCAAACCTTCCTCGGCCACCTTTGGCCAAAAGGGTGACCAACCCACCTTCAATGACAAGAAGGAAAGGCCATCATCTGATGCAAAGCCACCCATGAAACCCTCTTCTTCTGATACAGACGAAGAGGAGCTTCCCAAGGCTAAGGAAAAGCCTGTCACTGGAGCAAGAAGCTTGAGGAGGAGCTACAAGAACCTCAATAATAATAATAACAAGAAACCATCCTCTAACTCCACTCCTAAGACAGGGTCCTCGGGGAACAAGCCATCGGAGACCGTCAAACCGGAGAAGAGCAAAGCAGAGGGAGGGCCAGACAAGAAGAGGAATGCAGCTGCAGATTTCTTGAAAAGGATTAAGCGCAACACTTCGGCGGAAGCATCAAAGGGTGGTAGCGGTGGCAGTGGTGGTGGTGGAAGCGGCGGCGGTGGAGGAAGTAGTAGCAGCAGCAAGGGTGGTGGAGGTGGTAATGGTGTCAAAGAGCAGAAGAAAATGGTGAACAATGGAAAAGGGGATAAAGGGAAAGAAAGGGCATCAAGGCATAATAACGTTGGAGGAGGTTCAGGGTCTGGAGATAAAAGGAATAGTAAGAATGTTGAGAACAACTCACAGTCAAAGAGAAGTGTTGGTAGACCTCCAAAGAAAGCAGCAGAGACAAATGCAGGTTCTGCAAAGCGTGGGAGAGAAAGTAGTGCTAGTGCTGGCAAGGATAAGCGACCCAAAAAACGTTCCAAGAAATGA 2250 0.5458 MRMENHQNHKVESEPDIEKNHHHRHQQQQQQQHRNEVWGTWEELLLACAVNRHGFKDWDAVAMEVQSRTTRLLATAHHCEQKFDDLSRRFADQCNDDVPPSRQNGGAAAISDHVPWLDELRKLRVAELRREVQRSDVSILSLQLEVKRLEEEKTKEKDGKDDKKPDLAVSGELRPENDKTGGEVDEAGPANSEPEERTANNTDKTLPTMGDESDRENQSVNESNSTGSRFEKTGDGDAKAGTGPAPVQTGSLEPDPVLRKGKPVGEESNNGSYDALAKVPTCESVPPSEERKVEEDDNSSELHDSVAHSGEGGTRESSEVQSSASLTRKRKTRRRKEVSGGGGASSPAENDELATVKSEPLVGVLELIKGHEHSSLFERRLESQQDTDRYKDLVKQPMDLETIQLRLQKGHYSSCTSAFFRDLLLLFTNATVFFSHDTLESQVGRQLHRLATTEMKNHGQAQSDPIPRKNDSLPPNASLAKPDSLISKNKASGPILVCRKRSSMLAKPSSATFGQKGDQPTFNDKKERPSSDAKPPMKPSSSDTDEEELPKAKEKPVTGARSLRRSYKNLNNNNNKKPSSNSTPKTGSSGNKPSETVKPEKSKAEGGPDKKRNAAADFLKRIKRNTSAEASKGGSGGSGGGGSGGGGGSSSSSKGGGGGNGVKEQKKMVNNGKGDKGKERASRHNNVGGGSGSGDKRNSKNVENNSQSKRSVGRPPKKAAETNAGSAKRGRESSASAGKDKRPKKRSKK* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2224 749 MobiDBLite consensus disorder prediction 644 658 - -
Gso15g2224 749 ProSiteProfiles Bromodomain profile. 369 441 IPR001487 GO:0005515
Gso15g2224 749 MobiDBLite consensus disorder prediction 455 469 - -
Gso15g2224 749 PANTHER BNAC04G22430D PROTEIN 19 749 - -
Gso15g2224 749 Gene3D - 349 463 IPR036427 GO:0005515
Gso15g2224 749 MobiDBLite consensus disorder prediction 311 325 - -
Gso15g2224 749 CDD Bromodomain 364 455 - -
Gso15g2224 749 Pfam Bromodomain 364 438 IPR001487 GO:0005515
Gso15g2224 749 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 19 749 - -
Gso15g2224 749 Pfam Myb-like DNA-binding domain 37 70 IPR001005 -
Gso15g2224 749 CDD SANT 38 69 IPR001005 -
Gso15g2224 749 MobiDBLite consensus disorder prediction 1 25 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 455 487 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 564 595 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 596 627 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 506 749 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 285 310 - -
Gso15g2224 749 SUPERFAMILY Homeodomain-like 33 70 IPR009057 -
Gso15g2224 749 SUPERFAMILY Bromodomain 358 460 IPR036427 GO:0005515
Gso15g2224 749 MobiDBLite consensus disorder prediction 520 561 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 151 355 - -
Gso15g2224 749 Coils Coil 132 159 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 668 683 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 151 183 - -
Gso15g2224 749 MobiDBLite consensus disorder prediction 1 34 - -
Gso15g2224 749 SMART bromo_6 135 460 IPR001487 GO:0005515
Gso15g2224 749 MobiDBLite consensus disorder prediction 686 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2224 Gso-Chr15 50808464 50813562 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso15g2224 Bromodomain 5.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2224 - - gmx:100779988 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1253 8 11573661 11578773 Gso15g2224 15 50808464 50813562 GST