Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2200 ATGTCAGTTCCTTGTGTAGCAGGCCGGCAGAGAGACAAAGATCTCATCAAAGGCAAGAAGAAGAAAAACAAAGCAAGAGAAATTGGAATGGAAGGCAAAGGTGGAGGAGAAGTGAGAAGGCTTCACATCATTTACTTCCTTAGTCAGATAGGTGGTCGTGCAGATCATCCTCATCTAATTCGTGTTCTTCATCTTGCCCGAAATGGGGTTTATCTTAGAGATGTTAAGAGATGGCTTGGGGAATTGAGAGGAAAAGACTTGCCTGATGCTTTTGCTTGGTCCTACAAGAGCAGGAGGTACAAGAGTGGATATGTGTGGCAAGACTTGTTGGATGACGACCTCATAACCCCCATCTCTGACAATGAATACGTCCTCAAAGGATCACAAATCCACCCTACCCCATTTACAACAACTCCTTCACTTGCAGAAAAGAAAATTGCGGTTTGTGATATCCATGCTGAGAAGAAATGTACTCAAGTACAACTTGTAGAGGACGAAAACCAGCAGCCACAGCAGCAGCCTCTAGCGGAAGAAGAACCTCGAATTCAACAAGACTTGAATTCGAAAATAGATACTCTGACAAAAGGGTCATCAGAAATCAGCCAGGACTCATCATTGGTCTTCAGCTCAGACAGGTCATCTGTGACAGATGATGACTCTTCTAAGGTCGAAGAAGAGAAGCATATAGAGGCTACAGGCAAAAAGGGATTCAACGAAATCAACCAAGAGAAGTTAGAGACTTGCTCATTGCCTTCCTTGTATCACAATCTGTTGATTACGAAGGCTAGCCACAAAGATGACTTGAATAAAACCAGCTCACCTGAGTCATCCTTCTCCACTATATCATCATCATCATCTCAATCCTCTTTTACTAAGATCAGAAGCAATTCTACTAAAGTTTCTAATGTGTTCCGCAATTGGATTACCTGTGGCACTGTGGAAACAAAGGATGCAGCACTGGTCCTGATGAACCCGGCTCAAAAGAATTTATCCAAGGAACCTATCAACATACCTGAAAGAAGGGTTGAGATTTGTAAGGGAGACAAATTGGGAGGATCAGCCAGGTGTTTTAGAACTTCTTGGGGCCCTCATCACCAGAAACAACAATATGGGGCAAGAAAAAGCTTTGAAGGAAATGAAACTAACCGGAGCAGGAAAAAGTTAGGGGAGTTGCTAAATCAAACTTCTTCCAAACCATTTGGTGGACCAACTTGCTCGCAATGCGGGAAGTCGTTTAAGCCTGAGAAAATGCACAAACACATGAAGTCTTGTAAAGGAATGAAAGCCTTGGGAAAGTCATCCACAACTGTTGAGGAGGCACAGCTTCAGGGATCATCATCTTCATCTTATACAGATTACTTCTTGACCAACTAA 1374 0.4294 MSVPCVAGRQRDKDLIKGKKKKNKAREIGMEGKGGGEVRRLHIIYFLSQIGGRADHPHLIRVLHLARNGVYLRDVKRWLGELRGKDLPDAFAWSYKSRRYKSGYVWQDLLDDDLITPISDNEYVLKGSQIHPTPFTTTPSLAEKKIAVCDIHAEKKCTQVQLVEDENQQPQQQPLAEEEPRIQQDLNSKIDTLTKGSSEISQDSSLVFSSDRSSVTDDDSSKVEEEKHIEATGKKGFNEINQEKLETCSLPSLYHNLLITKASHKDDLNKTSSPESSFSTISSSSSQSSFTKIRSNSTKVSNVFRNWITCGTVETKDAALVLMNPAQKNLSKEPINIPERRVEICKGDKLGGSARCFRTSWGPHHQKQQYGARKSFEGNETNRSRKKLGELLNQTSSKPFGGPTCSQCGKSFKPEKMHKHMKSCKGMKALGKSSTTVEEAQLQGSSSSSYTDYFLTN* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2200 457 PANTHER F3F20.2 PROTEIN 31 445 - -
Gso15g2200 457 MobiDBLite consensus disorder prediction 204 226 - -
Gso15g2200 457 Pfam Protein SOSEKI, plant 42 329 IPR010369 -
Gso15g2200 457 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 31 445 IPR010369 -
Gso15g2200 457 MobiDBLite consensus disorder prediction 438 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2200 Gso-Chr15 50519304 50522626 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso15g2200 DUF966 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2200 - - gmx:100820603 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1319 8 12417238 12422631 Gso15g2200 15 50519304 50522626 GST