Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2194 ATGACATCAAATCCTGTCAAGATGCCTGATTTACCTGAGACACAGATGGAGCACAAGTTATCAGAAGCGGCACACCCTAGTGCTCATAGTAGTAGTGCAAATTCAGGAAACAACTCACCAACTCATCCCAAGAATGTGAACCAAGAAGCAAAAGACACGAGCACAACAACTGTCCACTACTCAGGAAATGAAACTGGACATATGGACCAGGCTTCCAAAACTGAAGCAAATTTGGAAGGTAAATCCAGACCCCAGAACTTACTGCCACCAAACAGGAACTTATCTGACTTCAACCCTCAACAACACCAAAGTCCAAGCACAAAGAAGCCTAATTCAAATTCTGATCATCATGCAAAGGCAATGTCTGTGTCTACCCCTCAAACAAAGACCAGTACCAATCAAGGTCAAGGGAGTGGTGCTAGTTCTCGGAGTGATAGCTTAGAGAGCACAAGTGCACCTATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGATTTCAAGGGTTGGCTCTCTCAATCTCAGCCATTTCAGGCTTCTCAAGCGCATCGGTTACGGAGACATTGGGAGTGTGTACCTTGTGGAACTTAAGGGAACTAGGACCTACTTTGCTATGAAAGTTATGGACAAGGCAGCTCTTATAAGCAGAAATAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTCCTCCCCACTTTGTATTCTTACTTTGAAACTGATAAGTTTTATTGCTTGATCATGGAATTCTGTAGTGGGGGTGATCTTCATTCTCTAAGACAAAAGCAACCTAACAAGTGTTTCACTGAAGAAGCTGCAAGATTTTATGCTTCAGAGGTGTTGTTAGCTCTCGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAGCCAGAGAATCTTCTAGTCAGAGATGAAGGGCACATAATGCTCTCAGATTTTGATTTATCCCTTCGCTGTTCCGTCAGTCCTACACTAGTCAAGTCTTCTTCCGCCCACGCAGGCAACAGTAGTAGCAGTGGCAACAATGATGTTGGAGGCATATTAACTGATGACCAAGCAGCGCAAAGCACTACTCAGGTATCAAGTTTTTTCCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGTGGAGGACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGCGTTCAATGTCATTTGTAGGGACACATGAGTACCTTGCTCCTGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTAGACTGGTGGACTTTTGGGATCTTCTTGTATGAGTTGTTGCTTGGAACGACCCCTTTCAAGGGTTCAGGATATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAAGTCAGTGCTGTGGCTCGTGACCTTATTAGAGGGTTGTTGGTGAAAGAGCCTCAGAAGAGAATTGCATATAAGAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTTTAGTTAGAAGTGCCACCCCTCCCCACATACCAGAGGCTATAGATTTCTCCAAGTATGCTAGCAAAGACACAGCAACCCCGGCAGACAAGAAGATGGCAGATATTGCTAATGATAAACACAGCAACAGTGCTACTGATTCTTACATAGATTTTGAGTATTTTTAG 1731 0.446 MTSNPVKMPDLPETQMEHKLSEAAHPSAHSSSANSGNNSPTHPKNVNQEAKDTSTTTVHYSGNETGHMDQASKTEANLEGKSRPQNLLPPNRNLSDFNPQQHQSPSTKKPNSNSDHHAKAMSVSTPQTKTSTNQGQGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMISRVGSLNLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLIMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHAGNSSSSGNNDVGGILTDDQAAQSTTQVSSFFPRILPSKKNRKAKSDFGLLVGGGRLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLLGTTPFKGSGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPEAIDFSKYASKDTATPADKKMADIANDKHSNSATDSYIDFEYF* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2194 576 CDD STKc_phototropin_like 179 537 - -
Gso15g2194 576 Gene3D Phosphorylase Kinase; domain 1 179 264 - -
Gso15g2194 576 Gene3D Transferase(Phosphotransferase) domain 1 265 334 - -
Gso15g2194 576 SUPERFAMILY Protein kinase-like (PK-like) 178 539 IPR011009 -
Gso15g2194 576 MobiDBLite consensus disorder prediction 1 158 - -
Gso15g2194 576 SMART serkin_6 181 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2194 576 MobiDBLite consensus disorder prediction 25 153 - -
Gso15g2194 576 ProSiteProfiles Protein kinase domain profile. 181 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2194 576 MobiDBLite consensus disorder prediction 340 360 - -
Gso15g2194 576 Pfam Protein kinase domain 182 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2194 576 Pfam Protein kinase domain 410 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2194 576 Gene3D Transferase(Phosphotransferase) domain 1 410 534 - -
Gso15g2194 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Gso15g2194 576 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 34 576 - -
Gso15g2194 576 PANTHER FLIPPASE KINASE 1-RELATED 34 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2194 Gso-Chr15 50457883 50461934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2194 147 576 AGC Kinase Gene Family AT1G79250 72.991 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso15g2194 Pkinase 6.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2194 - - gmx:100819001 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1329 8 12510803 12515206 Gso15g2194 15 50457883 50461934 GST
Gso15g2194 15 50457883 50461934 Gso8g1937 8 19325947 19328600 PCT