Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2192 ATGAAGTATGTGTTGGTGACTGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTCACTGCCAGCAGTATTGGGTTAATCCTCAAGGCCTGTGGTCTTAGAGTTACCTCTATCAAGATTGACCCCTACTTGAACACTGATGCGGGAACTATGTCTCCTTTTGAGCATGGAGAGGTTTTTGTCTTAGATGATGGTGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTAACTTGTGACAATAATATCACTACTGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTACAGGTTGTTCCGCACGTAACAGATGCTATCCAAGAGTGGATAGAACGTGTAGCAAAGATACCAGTTGATGGGAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCCATGCCTTTTATTGAAGCACTTGGTCAATTCTCATACCGTGTAGGCCCTGGCAACTTCTGTTTGGTTCATGTCAGCCTGGTTCCTATTCTCCATGTTGTTGGTGAACCGAAAACAAAGCCAACTCAGCACAGTGTTCGTCAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGCAGTTCGAAGGAACTTGATGACAATGTCAAGGCAAAACTTGCTCAATTCTGTCATGTGCCGTTGTCAAACATACTTACTCTCCATGACGTTCCAAATATTTGGCACATTCCTTTGCTATTGAAAGACCAGAAGGCACATGAGGCGATCCTGAAAGCATTAAACTTGCTAGGTGTTGCTGCAGAGCCTAATTTGAAGGAGTGGACTTCAAGGACAAAAGTTTATGACAGATGTCATGAAATTGTTAGAATTGCAATGGTGGGAAAATACACTGGCCTTTCAGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTTCTGTTGCTCGAAACCGTAAACTTATTGTGGACTGGGTTCCAGCTGGGGATCTTGAAGATGCTACTTATAATGAGGATCCTGAGGCATATAAAGCTGCTTGGAGTCTTTTAAAGGGTGCTAATGGGGTTCTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCGAGAACATAATGTTCCATTTCTCGGCATTTGCCTGGGAATGCAAATTGCTGTTATTGAGTTTGCACGATCTGTTCTCGGTCTGCATGATGCTACTAGCACAGAATTCAATCCTGAAACCAAGACCCCTTGTGTCATATTTATGCCAGAAGGCTCAAAGACTCATATGGGAGGAACTATGCGTCTTGGCTCAAGAAGAACTTACTTTGAAGTTGCTGACTGCAAATCCGCAAAATTGTATGGCAATGTAAGCTTTGTTGATGAGCGACATCGGCATAGATATGAGGTTAATCCTGACATGATATCACCGCTAGAGAATGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAGGCGTATGGAGATAGTTGAGTTGCCTAGCCATCCTTTTTTTATTGGCGTTCAGTTTCACCCTGAGTTCAAGTCCAGACCAGGGAAACCTTCTCCGCTCTTCTCAGGATTAATAGCAGCAGCAAGTGAATCTAGGAGGACAATCATGGTGCCAAGTAATGGTCACGCCAAGTTAACTAATGGAAATGGAATGTGCAATGGACACTCACCAAAACTGAAAGCACACCAAAAGGGAAATGGCTTCAATTCATCCAATGGTTCCTTAAATGGTATATATACCAATGGCAATGGGGTGTATGTGGATGGTAGTTGTTAG 1830 0.429 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTCDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHVTDAIQEWIERVAKIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLVHVSLVPILHVVGEPKTKPTQHSVRQLRGLGLTPNLLACRSSKELDDNVKAKLAQFCHVPLSNILTLHDVPNIWHIPLLLKDQKAHEAILKALNLLGVAAEPNLKEWTSRTKVYDRCHEIVRIAMVGKYTGLSDAYLSVLKALLHASVARNRKLIVDWVPAGDLEDATYNEDPEAYKAAWSLLKGANGVLVPGGFGDRGVQGKILAAKYAREHNVPFLGICLGMQIAVIEFARSVLGLHDATSTEFNPETKTPCVIFMPEGSKTHMGGTMRLGSRRTYFEVADCKSAKLYGNVSFVDERHRHRYEVNPDMISPLENAGLSFVGKDETGRRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFSGLIAAASESRRTIMVPSNGHAKLTNGNGMCNGHSPKLKAHQKGNGFNSSNGSLNGIYTNGNGVYVDGSC* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2192 609 SUPERFAMILY Class I glutamine amidotransferase-like 298 549 IPR029062 -
Gso15g2192 609 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Gso15g2192 609 PANTHER CTP SYNTHASE 1 575 IPR004468 GO:0003883|GO:0006221
Gso15g2192 609 PANTHER CTP SYNTHASE 1 575 - -
Gso15g2192 609 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Gso15g2192 609 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Gso15g2192 609 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Gso15g2192 609 Gene3D - 295 557 IPR029062 -
Gso15g2192 609 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Gso15g2192 609 Gene3D - 1 292 IPR027417 -
Gso15g2192 609 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Gso15g2192 609 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Gso15g2192 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2192 Gso-Chr15 50430996 50437663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2192 K01937 - gmx:100816167 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1334 8 12554834 12561628 Gso15g2192 15 50430996 50437663 GST
Gso15g1827 15 37201225 37209219 Gso15g2192 15 50430996 50437663 PCT
Gso8g1933 8 19281260 19288735 Gso15g2192 15 50430996 50437663 PCT