Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2171 ATGGAGAGAATGTTCCCTCCCAAGAAGCCCTCTACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGAGACTCGGGTCTTGTCCTCACCACTGACCCTAAACCTCGCCTCCGTTGGACTGTTGAGCTCCATGAACGCTTTGTTGATGCTGTTACTCAGCTTGGAGGGCCTGATAAGGCCACTCCTAAAACCATCATGAGGGTTATGGGGGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGCAAGCAGCCCCACAAGGAATTCAATGATCACTCGATTAAGGATGCTTCGGCTTTAGAACTGCAGCGAAACACTGCTTCGTCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGATTGCATGAACAACTTGAGGTTCAAAAACACCTTCAGCTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAGGCTTATCAAACACTTGCTGGTGAAAACATGGCATCTGCTGCCACTAACTTAAAGGGTGCTATTGTACCTCATCACCAAGGGATCCCTGACATGGGAGTAGTGACGAAGGAGTTTGGTTCCCCTCTTGGTTTTTCTTCTTTCCAAGACCTTGAAAACATTTATGGAGGTGACCAAATTGACCTTCAGCAGAACATGGAGAAGCCACCCCTTGATCATGGTTTCATGCCAATCAATGAGACCTTGTGTCTGGGGAAGAAGAGGTCCAACAACCCTTACAGTGGGAGTGGGAAGAGCCCTTTGATTTGGAGTGATGATCTAAGGCTTCAAGATTTGGGAGGGCCAGCCTCATCATGCCTTGGCCCTCAAGATGACCCTTTCAAAGGTGATCAGATTCAGATTGCACCACCAGGATCATTGGATAGAGGAGCTAGCACTGACATTGATCCCATGTCAGAGATCTATGACTCAAAGCCTGTGCTTCAGAGTGAAGAGAAAAAGTTTGATGCATCATCTATGAAGCTTGAAAGGCCATCACCAAGAAGAGCACCTCTTCAGGCTGAAAGGATGAGCCCTATGATCAGCACTGGTACCATGGCACAAGGTAGAGGCTCACCATTTGGGTGA 1113 0.4753 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASAATNLKGAIVPHHQGIPDMGVVTKEFGSPLGFSSFQDLENIYGGDQIDLQQNMEKPPLDHGFMPINETLCLGKKRSNNPYSGSGKSPLIWSDDLRLQDLGGPASSCLGPQDDPFKGDQIQIAPPGSLDRGASTDIDPMSEIYDSKPVLQSEEKKFDASSMKLERPSPRRAPLQAERMSPMISTGTMAQGRGSPFG* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2171 370 MobiDBLite consensus disorder prediction 321 338 - -
Gso15g2171 370 MobiDBLite consensus disorder prediction 276 370 - -
Gso15g2171 370 Gene3D - 34 92 - -
Gso15g2171 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 322 IPR044848 GO:0003700
Gso15g2171 370 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 322 - -
Gso15g2171 370 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Gso15g2171 370 MobiDBLite consensus disorder prediction 1 20 - -
Gso15g2171 370 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Gso15g2171 370 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Gso15g2171 370 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Gso15g2171 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2171 Gso-Chr15 49881930 49884666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2171 4 370 G2-like Transcription Factor Family AT1G79430 58.005 2.82e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso15g2171 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2171 - - gmx:100807793 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1354 8 12941283 12943984 Gso15g2171 15 49881930 49884666 GST