Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2160 ATGGCGGAGAGCGACGGCAGACACCGTCGGAGGGAACCGCTTCCGGTGTCATCGGAGGAAGATGCTGCTAATGCTTCGTGGAGACTTAACGTGGAGGAGTTTCGTTTGCCAAACCAAACGCATGATCATCATCAACAGCACCGTTCATTCACTTTCCGCGGCCTTCTCCGCAAGCCCAGGAAGCAACGCAAAGTGGCAGAATATTATAAGAAACAGGAGAGTCTCCTTGAAGGATTTAATGAGATGGAGACAATGACTGAAACGGGTGGTTTCCCAGGAACTCTTACTGAGGATGAACTGAAGCAACTAGCTAAGAGTGAGAGGATTGCTGTTCATGTGTCAAATATATGTAACTTGGTGCTGTTTGTAGCAAAGGTTTATGCATCAGTTGCGAGCAGATCATTGGCAGTCATTGCTTCAACCATGGATTCTCTCTTGGATCTCTTGTCAGGCTTCATATTGTGGTTTACTGCTCATGCCATGAAAAACCCAAACCAATATCGCTATCCAATTGGAAAGAAGCGCATGCAACCTGTGGGTATCATTGTTTTTGCATCAGTGATGGCCACCTTGGGGCTGCAGATTTTGATTGAATCTGGTCGACAACTTATTTCCAAGGTCAAGCCCGACATGGATCCAGCAAAACTGCATTGGATGATGGGGATTATGGTGTTTGTGACTGTAGTGAAGTTCATTCTTATGGTCTACTGTCGAAGATTTAAAAATGAAATCATTAGAGCATATGCACAGGATCACTTATTTGATGTTATTACTAATTCTGTTGGATTAGCTGCTGCTGTTCTAGCTGTCAAGTTCTACTGGTGGATTGATCCAACAGGAGCTATTGTTATAGCATTGTATACAATTAATACATGGACCAAGACTGTCATTGAGAATGTTGGTTCACTCATCGGAAGAACAGCACCACCTGATTTTCTGGCCAAGTTAACTTACCTCATATGGAATCACCATGAGCAGATCAAGCACATAGATACTGTTAGAGCATACACCTTTGGTGCACATTACTTTGTGGAAGTTGACATTGTGTTGCCAGAAGACATGCTTCTCCACCAAGCACACAACATTGGTGAGACACTCCAAGTGAAGCTAGAGCAGCTTCCAGAAGTTGAAAGGGCTTTTGTGCACATAGATTTTGAGTTCACTCATAGGCCAGAGCACAATACCATGGTGTGA 1194 0.4397 MAESDGRHRRREPLPVSSEEDAANASWRLNVEEFRLPNQTHDHHQQHRSFTFRGLLRKPRKQRKVAEYYKKQESLLEGFNEMETMTETGGFPGTLTEDELKQLAKSERIAVHVSNICNLVLFVAKVYASVASRSLAVIASTMDSLLDLLSGFILWFTAHAMKNPNQYRYPIGKKRMQPVGIIVFASVMATLGLQILIESGRQLISKVKPDMDPAKLHWMMGIMVFVTVVKFILMVYCRRFKNEIIRAYAQDHLFDVITNSVGLAAAVLAVKFYWWIDPTGAIVIALYTINTWTKTVIENVGSLIGRTAPPDFLAKLTYLIWNHHEQIKHIDTVRAYTFGAHYFVEVDIVLPEDMLLHQAHNIGETLQVKLEQLPEVERAFVHIDFEFTHRPEHNTMV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2160 397 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 17 396 - -
Gso15g2160 397 Pfam Cation efflux family 113 303 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gso15g2160 397 PANTHER METAL TOLERANCE PROTEIN 9 17 396 - -
Gso15g2160 397 SUPERFAMILY Cation efflux protein transmembrane domain-like 106 305 IPR027469 -
Gso15g2160 397 MobiDBLite consensus disorder prediction 1 22 - -
Gso15g2160 397 TIGRFAM CDF: cation diffusion facilitator family transporter 111 384 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Gso15g2160 397 MobiDBLite consensus disorder prediction 1 17 - -
Gso15g2160 397 Pfam Dimerisation domain of Zinc Transporter 310 384 IPR027470 -
Gso15g2160 397 Gene3D Cation efflux protein transmembrane domain 108 303 IPR027469 -
Gso15g2160 397 Gene3D Cation efflux protein, cytoplasmic domain 308 385 IPR036837 -
Gso15g2160 397 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 308 384 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2160 Gso-Chr15 49656373 49660105 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2160 - - gmx:100805118 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1365 8 13068698 13072927 Gso15g2160 15 49656373 49660105 GST