Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2150 ATGGAACAATCAAGATTCCAAAACACGGTTCTATACAATAACATGGAAGCTAGACACGACGAATACCACCAGCCTGGGTCACAGTCAGTGATGCAGGACCATCTGGATAGCACACATTCCGGTAGAAGACCAGCTGACCTCAATACATCAGAAGTTAAACCTGTACTTAATTACTCCATACAGACAGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATATCAGGAAGCCTGTATTATCAAATGTCAGCGATTCCAATTATACCCCAGGTTATATGGAACTGAAAGGCATTTTAGGCATCAGTCATGCAGGATCTGAAAGTGGATCTGATATTTCTATGCTCTCAATAGTTGACAAATATCCAAAAGAATTTGATAGAATGAATACATCATTACCTGGAGACAGAAGCAACTATGGGTCGATTCAATCAATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTGTGCCGGGGTATGGCTCTTTTGGAGTTTATGATAGATCCATGATGATGAAGTTTCTTTGTAGCTTTGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGAATAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTACAAATCTATAATCAGGTTCATGCAATCAAGTATCAGCTTCCTGGGGAAGATCTCGATGCTTTAGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTATTAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTATTCTCTATGAGTGATTTGGAGGATGCTCAGTTTGGTCTCAGCAGCATCGGCGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGAATCAAGAAAAAACACAACCATGTTTGGTGTCAGTTTTTCTGCAAATGATATAAATGAATTGGACAGGCAAAGTATTGACAGGGAGACTAGTAGAGTTGGTGTAGAATCTATTGCACAGAGTGCTCCCCTGACTAACAATTTTGACTCATCATTGGCTACTCATTCTTCACCACCAGTGCTACCAACTTCCTCAAATTCTTATGATGCGTATCCACAGTTTTATGGTGATCAAATGATGCACCATGGGGAACCTAGTGATCAATATACTATTAATCATGGCCTTAATCCTTCTCATAAACCTGTTATTGGAGAGACTCCTATCATTATGCCTCCTCATATGCTTTTTAATCAACAAGGGATTTTGGGTGAAAGCCTTCAACCTCGTGGAATACAAGTACAAAATTCAGAAATACCAGGAACATTGGCAAACAATCTGGTTGATAGTTCAATTCAACAAGGAAGTGACCCTGGCAAAGTTTTAGTCTCAGAATTACCGTCAACAGCTCCTGCACAACTGCTTAATAATGGTTACATGAAAAATAATTTTCCTGAAGCATCAGTTGTTGTTACTGCACCAGAGGGGCATTCGTTGCATCCAACAAAGATGGACAAGCTCCAGGATTATGAAGTGACTTCTTCTACATCTAGCAGTGCATTTGGTGCTGCTTATGTTGATTCCCGCTCCAATGCAGCTGACTTGAGTTCGCTTCATCCTCCTCCTCTTCCTAAAAGAGTTTATTATTCGGAGAGAATTCCACGGGAACAATTAGAGTTGCTGAATCGGTCCTCAAAATCAGATGATACACACAGTTCTCAGTTTCATGTTTCAGATTTACTTTCTGACATCAACCCACCAGATTCAGTTACAGAATCTGGTGACAAGTTGCATGGTGGAAATCTGCCTAATCTATCTGAGGAATTAGGCATCGCGGAAAATCACTTGCATGCAGATGACTATGCTGTTGATAATGTGGCTGTCAATCATCAAATATACAAACTGCTGCCTGATGCAAGCAGTCAGATGAAATCAAAGCTAACTGAGCATGTGAATCCTGAGTTGAAGCAAGTATTATTGGACAATGGAGGATGCAAAGATTTGTTAAATAAGGATGATGTTGTTGGGTTGGAAACGGAAATTTATAGTAAAAATAACTATAATAAACCCCTGGTGGATGAGACAAAAGCCAGCAAACCAGACTTGCCTAATTTGCGCCAGGTTTCTTTTGATAAGCTCCTTGATGATCCAGCATCCAATCTTCCAGAAGTTGATTGGGGTGATACTTCTGTGAAGGAGTCTAATGAGGATATTAATGTTCAAGCCTTACCTGTTTCCATAAATGGGAATACAACTACAGAAGATTATTCTGAAGAATTTCCTTCAAATGTTGTTTCCAAACAAGTGCAAGCTGACATCCTTATTGATATTAATGATCGGTTCCCCCGTGAATTTTTCACTGATATGTTCTCTAAAGCAGTACTTGAAGAAGATCCCTCTAGTCTGCATCCATTAACCTCAGATGGAGTGGGCTCAAGTGTAAACATGGAAAATCGTGAACCTATACGATGGTCATATTTTCAAAAATTGGCTCAAGAAGGGATTGATAATGTGTCTCTTATGGACCAGGATCATCTTGGTTTTTCACCAGGAAAAGTGGTTGGAGATAATAGGGCTCAACATGTTACACCTTTAACAACTGATGAAGTTTCTCTGAACCATGCAGAGTCCCACCTTGATTTTGTTGAAGAAAATATAAGAGACTTGCATGGAAGGATTGGAGCAGAAACCACTCTTCTGAAGTCAAATTATGATCATTCCCAAGTGAATGACACTGAAAGTATGCAATTTGATGTTATGATGGAAAACATAAGAGCACAAGAGTCAGGATATGAGGTTGGAAAGTTTGAAAAAATGAATAGCAATCTACCTCCTCCTGATCCTTCTTTTGCAGGAGAGTTTGATCCGAGTACCTTTCAGGTCATAATGAATGACGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGGAAATGGCGAGGAACAGATGTTGCCATTAAAAGAATAAAGAAAATCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCAGAAATTCTTTCCAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACGATGGCTACTGTTGCAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTACACTTTGACTTAAAATGTGACAATTTGTTGGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGCTTGTCCAAAATTAAACGAAATACCTTGGTTTCTGGTGGTGTGCGAGGGACACTTCCTTGGATGGCACCAGAGCTTCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGCATTGTGAATAACACATTAAGGCCAACAATCCCAGATCATTGTGATTCTGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCTAATCCTGCTGCTAGGCCATCCTTCACTGAAATAGCCAGTCGATTGCGCCTAATGTCTGCAGCAGCTAGCCAAACCAAAACACTGAAGCCAACTAAATGA 3759 0.4057 MEQSRFQNTVLYNNMEARHDEYHQPGSQSVMQDHLDSTHSGRRPADLNTSEVKPVLNYSIQTGEEFALEFMRDRVNIRKPVLSNVSDSNYTPGYMELKGILGISHAGSESGSDISMLSIVDKYPKEFDRMNTSLPGDRSNYGSIQSMPRTSLNQDNRQFVPGYGSFGVYDRSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKALQIYNQVHAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLLDREGSQKLRMFLFSMSDLEDAQFGLSSIGDDSEIQYVVAVNGMDLESRKNTTMFGVSFSANDINELDRQSIDRETSRVGVESIAQSAPLTNNFDSSLATHSSPPVLPTSSNSYDAYPQFYGDQMMHHGEPSDQYTINHGLNPSHKPVIGETPIIMPPHMLFNQQGILGESLQPRGIQVQNSEIPGTLANNLVDSSIQQGSDPGKVLVSELPSTAPAQLLNNGYMKNNFPEASVVVTAPEGHSLHPTKMDKLQDYEVTSSTSSSAFGAAYVDSRSNAADLSSLHPPPLPKRVYYSERIPREQLELLNRSSKSDDTHSSQFHVSDLLSDINPPDSVTESGDKLHGGNLPNLSEELGIAENHLHADDYAVDNVAVNHQIYKLLPDASSQMKSKLTEHVNPELKQVLLDNGGCKDLLNKDDVVGLETEIYSKNNYNKPLVDETKASKPDLPNLRQVSFDKLLDDPASNLPEVDWGDTSVKESNEDINVQALPVSINGNTTTEDYSEEFPSNVVSKQVQADILIDINDRFPREFFTDMFSKAVLEEDPSSLHPLTSDGVGSSVNMENREPIRWSYFQKLAQEGIDNVSLMDQDHLGFSPGKVVGDNRAQHVTPLTTDEVSLNHAESHLDFVEENIRDLHGRIGAETTLLKSNYDHSQVNDTESMQFDVMMENIRAQESGYEVGKFEKMNSNLPPPDPSFAGEFDPSTFQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVQDGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPDHCDSEWRTLMEQCWAPNPAARPSFTEIASRLRLMSAAASQTKTLKPTK* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2150 1252 Pfam Protein tyrosine and serine/threonine kinase 973 1235 IPR001245 GO:0004672|GO:0006468
Gso15g2150 1252 MobiDBLite consensus disorder prediction 23 47 - -
Gso15g2150 1252 SUPERFAMILY CAD & PB1 domains 191 279 - -
Gso15g2150 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1097 1109 IPR008271 GO:0004672|GO:0006468
Gso15g2150 1252 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 87 1251 - -
Gso15g2150 1252 Coils Coil 877 897 - -
Gso15g2150 1252 Pfam PB1 domain 191 274 IPR000270 GO:0005515
Gso15g2150 1252 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1251 - -
Gso15g2150 1252 CDD STKc_MAP3K-like 978 1235 - -
Gso15g2150 1252 SMART serkin_6 972 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2150 1252 PRINTS Tyrosine kinase catalytic domain signature 1054 1067 IPR001245 GO:0004672|GO:0006468
Gso15g2150 1252 PRINTS Tyrosine kinase catalytic domain signature 1091 1109 IPR001245 GO:0004672|GO:0006468
Gso15g2150 1252 PRINTS Tyrosine kinase catalytic domain signature 1162 1184 IPR001245 GO:0004672|GO:0006468
Gso15g2150 1252 PRINTS Tyrosine kinase catalytic domain signature 1206 1228 IPR001245 GO:0004672|GO:0006468
Gso15g2150 1252 ProSiteProfiles Protein kinase domain profile. 972 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2150 1252 Gene3D - 193 276 - -
Gso15g2150 1252 SMART PB1_new 189 276 IPR000270 GO:0005515
Gso15g2150 1252 ProSitePatterns Protein kinases ATP-binding region signature. 978 1003 IPR017441 GO:0005524
Gso15g2150 1252 CDD PB1_UP2 178 274 - -
Gso15g2150 1252 Gene3D Phosphorylase Kinase; domain 1 965 1059 - -
Gso15g2150 1252 SUPERFAMILY Protein kinase-like (PK-like) 959 1235 IPR011009 -
Gso15g2150 1252 Gene3D Transferase(Phosphotransferase) domain 1 1060 1251 - -
Gso15g2150 1252 MobiDBLite consensus disorder prediction 584 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2150 Gso-Chr15 49504388 49513960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2150 28 583 MAP Kinase Kinase Kinase AT1G16270 38.462 8.76e-94 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso15g2150 PK_Tyr_Ser-Thr 5.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2150 - - gmx:100801946 2472.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g1374 8 13172651 13181763 Gso15g2150 15 49504388 49513960 GST