Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2146 ATGGCACTGAGCACGTACTCCAACTTTGACACTACTCTTCAAATTCCCCACTTAGAAACAAACACTTTCCATGAAGCCATACCAGAAGTAGCAGCACCAAACCTCCAACATTTTCTTCCACACTCAGATGAAAGCCTCTTCCTTTCAAACGCGCTTTTTGAGAACTACATTGACCCAACTTGTGATTTTCTCTATACTCCCGAGATCAATCCCTTCACTTCACTCACTCATCATGATGACATTTTCCCAACTCATGAAGATTACAATCTTCTCCCATGCCCTAAACGCCAAAAGTGCTGCTACGAGAAAAACCAACAACAAGAACACGTGTTCTTTTCACTGCAAGAGCTTACTACATCAACACTTCCATCCAATTTCCTAGACAGGTATGCTGTGCCTTATGATAATAACTTCTCCTTCCAAGCAGAGGAACTCCAACAACAACTCTACGAGGTTCCACAATATGGTAGTACTTGTGTGGATCTTCAATGTGAGAAGAAAGGTTGCGAGAGAATCATATCTCCCCAGAGCGTAGCGGCAAGAGAAAGGAGAAGAAAGATCACTGAGAAAACTCAACAGCTTGGGAACTTGATTCCTGGTGGACCAAAGATGAACACAGCAGAGATGCTTCATGCAGCTGCGAAGTATGTTAAGTTCCTTCAAGCCCAAGTTGGAATGCTTGAACTCATGAACACATCCGAGGAATATAAAGCTGAATCTCATCCTGAAAATCTACATGCTCTAGTTGTTTCTCCCTTTGTTCAAGAGAAGCTGTACACGGAGGAAAGGTGCTTTGTGCCAAAAGAAATTGTCACCACTTTGGCAAATCATGAGGATCTTCAATCAAGACCTACCATCCTTGAGGATCTTAAACAGCTGATTGGGACAGACATTGAGAAGAAAGCAAAGAAAGAATAA 918 0.4237 MALSTYSNFDTTLQIPHLETNTFHEAIPEVAAPNLQHFLPHSDESLFLSNALFENYIDPTCDFLYTPEINPFTSLTHHDDIFPTHEDYNLLPCPKRQKCCYEKNQQQEHVFFSLQELTTSTLPSNFLDRYAVPYDNNFSFQAEELQQQLYEVPQYGSTCVDLQCEKKGCERIISPQSVAARERRRKITEKTQQLGNLIPGGPKMNTAEMLHAAAKYVKFLQAQVGMLELMNTSEEYKAESHPENLHALVVSPFVQEKLYTEERCFVPKEIVTTLANHEDLQSRPTILEDLKQLIGTDIEKKAKKE* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2146 305 Gene3D - 174 243 IPR036638 GO:0046983
Gso15g2146 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Gso15g2146 305 Pfam Helix-loop-helix DNA-binding domain 181 221 IPR011598 GO:0046983
Gso15g2146 305 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 290 - -
Gso15g2146 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 232 IPR036638 GO:0046983
Gso15g2146 305 SMART finulus 177 226 IPR011598 GO:0046983
Gso15g2146 305 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2146 Gso-Chr15 49459073 49460897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2146 66 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 37.190 8.46e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso15g2146 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2146 - - gmx:102667124 622.468