Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2145 ATGGTCGTTGATAAAATGGCTTCGACCCTTTTAACAAAGATGCTTTTGGGTCACCGATTGATACACCCTTCTTCGTTCCTCACTCACCAGCCACAGATTCTCTCTTCTCTATTCAGTAAACGGCTGTTTTGTATACGAGCTGTCCCGGTCTCAGCCTCTACATCCCAAAACATCAAAACAACTGGTTGGGCTCCTTGTATGGCTTCTTCCTCAGTTGGTAGAAGAGCTACATATTCAACACAATCTGTATCGACAAATGAGCCAGTTGTATCTGTAGATTGGCTTTATGATAACCTGAAGGAGCCAGATATCAAGGTACTAGATGCTTCGTGGTACATGCCGGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGTGCCCTTTTCTTTGATGTAGATGGAATAGCAGATCGGACTACAAAATTACCACACATGCTGCCATCAGCGGAAGCGTTTGCTGCTGCTGTTTCTGCTCTTGGCATAGAGAACAAAGATGATTTGGTTGTTTATGATGGAAAAGGATTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTATTTGGGCATGACAGAGTTTGGGTATTAGATGGTGGCCTGCCGAGATGGCGTGCATCAGGTTATGATGTTGAATCCAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCTACTGAGGCTATAGAGAAAGTATATAAGGGACAAACAGTTGGCCCACTCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGAACATTGATCAGGTAAAGAAAAATATAGAGGACAAAACTCACCAACACATAGATGCTCGATCAAAGCCTAGATTTGATGGAACTGTACAAGAGCCTCGAAAGGGAATCAGAAGTGGTCATGTACCTGGTAGCAAATGCATCCCTTTTGCACAGTTGTTAGATAGTTCACAGACATTGTTACCAGCAGATGAGTTGAAGAAGCGATTTGAACAAGAAGGCATCTCTCTGGAAAGCCCAGCTGTGACTTCATGTGGAACAGGCGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGTCTTAGAAAGTCTGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCACAATCAAATACACCTGTTGACACTTTATGA 1155 0.4329 MVVDKMASTLLTKMLLGHRLIHPSSFLTHQPQILSSLFSKRLFCIRAVPVSASTSQNIKTTGWAPCMASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSAEAFAAAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKVYKGQTVGPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPRFDGTVQEPRKGIRSGHVPGSKCIPFAQLLDSSQTLLPADELKKRFEQEGISLESPAVTSCGTGVTACILALGLHRLRKSDVAVYDGSWTEWGAQSNTPVDTL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2145 384 CDD TST_Repeat_2 259 375 - -
Gso15g2145 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 261 382 IPR036873 -
Gso15g2145 384 SMART rhod_4 90 214 IPR001763 -
Gso15g2145 384 SMART rhod_4 258 379 IPR001763 -
Gso15g2145 384 ProSitePatterns Rhodanese signature 1. 124 135 IPR001307 GO:0004792
Gso15g2145 384 Gene3D - 254 381 IPR036873 -
Gso15g2145 384 Gene3D - 81 224 IPR036873 -
Gso15g2145 384 ProSitePatterns Rhodanese C-terminal signature. 363 373 IPR001307 GO:0004792
Gso15g2145 384 ProSiteProfiles Rhodanese domain profile. 268 382 IPR001763 -
Gso15g2145 384 Pfam Rhodanese-like domain 91 210 IPR001763 -
Gso15g2145 384 Pfam Rhodanese-like domain 261 375 IPR001763 -
Gso15g2145 384 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 87 219 IPR036873 -
Gso15g2145 384 PANTHER THIOSULFATE SULFERTANSFERASE 70 382 IPR045078 GO:0016783
Gso15g2145 384 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 70 382 - -
Gso15g2145 384 ProSiteProfiles Rhodanese domain profile. 100 217 IPR001763 -
Gso15g2145 384 CDD TST_Repeat_1 89 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2145 Gso-Chr15 49431879 49439849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2145 67 384 Sulfurtransferasese or Rhodanese AT1G79230 77.673 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2145 K01011 - gmx:100796802 770