Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2140 ATGGCCTCTGCCACTGCCACCACTCTCTTCACCCCTAACCCCATGTTTTCAACTGAACACCACTCTCTCTCTCCATCTCCAACCATTCCCAAATCCTTTACTGGCCTCTGCAAGCCCTTCCATTCAAGGGTTCCCACTTCCATCCCCTTCTTCCACTGCAGAAGACCCAAGTTCTTTGTCAGGGCCACAGTTATAAAGTGGAGATGTCCAAAGCAAACTATCCCTCCCAATGATACCGGTTTTCAAAAGAAACTCCTGTATCTGGAATCCATCGGTATTGACTCTTTCTTGCTTATTGAAAACCATCCAACAGTGATCACAACCTCTCTTGCTGACATAAGATCCACCGTGGAGTACATTACCTCCTTGGATTTCACTGCAATTGAGTTTCGGCGTATGGTTGGCATGTGCCCCGAGATTCTGACCACCCAAGTCTCAGACCTCATACCTGTCTTCACCTTCCTTCATCGTGAGGTTCATGTGCCTGGCTCAGATATTAAGCGTGTAATAAATCGTCGTCCCAGGTTGCTTGTCAGCAGTGTTAGTAAGCGACTTCGTCCTACCCTGTACTTCCTCCAAAGTATTGGCATAGAAGAGGTAAACAAGCACACTGACTTGCTATCATGTAGTGTTGAGGAAAAGTTCATGCCCAGGATTGATTACTTTGAGAATATTGGGTTTTCTCGCCGTGATGCAACTTCAATGTTCCGAAGATTTCCTCAGCTATTTTGTTATAGTATTAAAAATAACTTGGAGCCTAAATACAGTTACTTTGTGGTGGAGATGGGGAGAGATCTGAAGGAGCTGAAAGAATTCCCACAGTATTTCTCATTTAGCCTAGAGAATAGGATTAAGCCTAGGCATAAACAGTGTGTAGAAATGGGGGTGTGTTTTCCTCTCCCTGCCTTGTTAAAAACAAGTGAAGTGAAATTTCAAAGTAGATTAGACGTATGTGTAAATTCTTCAACCCCCTTGAAAACATCCCCTCTGTGGTCTGCTGGCTGTGATGTTTATGACGTATAG 1023 0.4428 MASATATTLFTPNPMFSTEHHSLSPSPTIPKSFTGLCKPFHSRVPTSIPFFHCRRPKFFVRATVIKWRCPKQTIPPNDTGFQKKLLYLESIGIDSFLLIENHPTVITTSLADIRSTVEYITSLDFTAIEFRRMVGMCPEILTTQVSDLIPVFTFLHREVHVPGSDIKRVINRRPRLLVSSVSKRLRPTLYFLQSIGIEEVNKHTDLLSCSVEEKFMPRIDYFENIGFSRRDATSMFRRFPQLFCYSIKNNLEPKYSYFVVEMGRDLKELKEFPQYFSFSLENRIKPRHKQCVEMGVCFPLPALLKTSEVKFQSRLDVCVNSSTPLKTSPLWSAGCDVYDV* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2140 340 PANTHER OS03G0360600 PROTEIN 70 325 - -
Gso15g2140 340 SMART mt_12 96 126 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 SMART mt_12 199 228 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 SMART mt_12 233 265 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 SMART mt_12 167 198 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 PANTHER CGI-12 PROTEIN-RELATED 70 325 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 Pfam mTERF 165 312 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 Pfam mTERF 68 166 IPR003690 GO:0003690|GO:0006355
Gso15g2140 340 Gene3D Transcription termination factor 3, mitochondrial 143 319 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2140 Gso-Chr15 49348316 49352009 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso15g2140 mTERF 4.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2140 K15032 - gmx:100794678 695.271