Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2139 ATGCGAAGCTGCATCAACCTCTGGATCGTGGCGGCACTCGTCATCCCCGTGCTCCTCACTCTCAGAAGCCCTCGAGGCGAAACCCAAACCCAAACCCAAACCACTTCTTCTTTCTCCGATTCTTCTACCTTCTCCGTGAAGCTTGCGAACTCATTTCCATTCAACCAAAGGATCCGAGATGGGTCGAATCTCGAATACGACTTCTACATGGATACGTGTCCCCAAGCGGAGGGTGTTGTTCGTTCGGCGCTCACTCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTTCTTCGTCTCTTCTTCCACGATTGCTTCATCGAGGGGTGTGATGCTTCGTTGCTGTTGGATGAGAACAATGGTGATAGAAACCTTTCCGTGGAGAAGCAGGCCGTGCCGAATCAGACATTGAGAGGTTTTGACAAAATTGACTTGATCAAGGAAGAGGTGGAGCAAGCATGTCCCGGGGTTGTGTCTTGTGCTGACATACTTGCTCTTGCAGCAAGAGATTCCATTGTTTTGGCTGGTGGACCTTTCTATCCAGTTTTAACAGGCAGAAGGGATAGCCATCAATCATTTTTCGAGGAAGCAACTGATCAGATTCCCAGACCTGATGATAACGTTACACGCACACTTAATCTCTTCAATCTCAGAGGATTTAATGCAAGAGAAACATTCCCCATTCTTAATAAGTTGTAA 702 0.4815 MRSCINLWIVAALVIPVLLTLRSPRGETQTQTQTTSSFSDSSTFSVKLANSFPFNQRIRDGSNLEYDFYMDTCPQAEGVVRSALTRIYFDHRDVAPALLRLFFHDCFIEGCDASLLLDENNGDRNLSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADILALAARDSIVLAGGPFYPVLTGRRDSHQSFFEEATDQIPRPDDNVTRTLNLFNLRGFNARETFPILNKL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2139 233 Pfam Peroxidase 80 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PANTHER PEROXIDASE 68 230 - -
Gso15g2139 233 PANTHER PEROXIDASE 25-RELATED 68 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Haem peroxidase superfamily signature 95 109 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Haem peroxidase superfamily signature 159 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Haem peroxidase superfamily signature 177 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 SUPERFAMILY Heme-dependent peroxidases 63 226 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 Gene3D - 63 219 - -
Gso15g2139 233 ProSiteProfiles Plant heme peroxidase family profile. 63 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Plant peroxidase signature 73 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Plant peroxidase signature 97 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Plant peroxidase signature 139 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Plant peroxidase signature 158 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 PRINTS Plant peroxidase signature 177 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso15g2139 233 ProSitePatterns Peroxidases active site signature. 95 106 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2139 Gso-Chr15 49341380 49343470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2139 3 226 Peroxidase AT4G33870 44.196 1.58e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2139 K00430 - gmx:100799801 437.573