Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2131 ATGGCGGCGCCGAACAGGATCGAACGCGCCCACCAGATGTACCGCGACGGAAGTTACGAGGAGGCGTTAGGGTTCTACACGGAAGCAATCGCCTTGGCCAAGACCAACCCTCAGAAGATCGCTTTGCATAGCAACCGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACTTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTAGTTACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAGCAGACTTTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGTTTGAAGACGCAATTGGCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTCAAGAACAGGAAGATGAGGAACCTGAGGTGATATCACAAGGAGAAAATGAAAATGAAGAGATGGGAGAGAAATATTCATCGATTTCTAATATTAGGACAGATCAAAAGGTTGAGCTTGGCAAAGGTATTATTATTGCTGATTGTGCTCCCCATGAAACAGACCTCAAATTTTCATCCAAGCAAGGAAGAAACCAAAACCATGAGCCTAAGAAGTCCATAGCAGATGCTATAGCTCCTAAAGCACCAAACAGGGAAACAACAGAGCAACATTCAAAAGGGTGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCACGGTGGGACAGTGTTGAAGATGATTCTAGTGATGATGACGATGACGATGAAGATGAAGAATCTTTGCCTCAGTACCGATTTCGTGTAAGAACAGTTGGTGTCCGTCCTGTAAAGTGA 843 0.4508 MAAPNRIERAHQMYRDGSYEEALGFYTEAIALAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVSRLLELNPSSEVYQNLQARLKTQLALAPIPESEEEFQEQEDEEPEVISQGENENEEMGEKYSSISNIRTDQKVELGKGIIIADCAPHETDLKFSSKQGRNQNHEPKKSIADAIAPKAPNRETTEQHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDDDEDEESLPQYRFRVRTVGVRPVK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2131 280 Pfam Anaphase-promoting complex, cyclosome, subunit 3 18 94 - -
Gso15g2131 280 MobiDBLite consensus disorder prediction 127 162 - -
Gso15g2131 280 MobiDBLite consensus disorder prediction 247 262 - -
Gso15g2131 280 SMART tpr_5 3 36 IPR019734 GO:0005515
Gso15g2131 280 SMART tpr_5 40 73 IPR019734 GO:0005515
Gso15g2131 280 SMART tpr_5 74 107 IPR019734 GO:0005515
Gso15g2131 280 MobiDBLite consensus disorder prediction 191 207 - -
Gso15g2131 280 SUPERFAMILY TPR-like 7 120 IPR011990 GO:0005515
Gso15g2131 280 Gene3D Tetratricopeptide repeat domain 2 146 IPR011990 GO:0005515
Gso15g2131 280 MobiDBLite consensus disorder prediction 130 149 - -
Gso15g2131 280 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 280 - -
Gso15g2131 280 MobiDBLite consensus disorder prediction 191 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2131 Gso-Chr15 49091774 49094506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2131 2 121 Calmodulin-binding Proteins AT3G25230 32.576 2.46e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2131 - - gmx:100792046 521.161