Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2130 ATGGTTCAGCCAACATGGTTATTTTCACTTTTGATACTAACGCTTCAATTATCAGCATCAGGGGTCAATTCCACGAAGTTCACTTTGGTTAACCAATGCAACTACACGGTGTGGCCAGCGTTAAGCGGAGATGATTATCTTTCAACGACTGGCTTCGTTTTGAGAAGTGGCGAATCTTCCACTGTGACTCCACCTGCAAAATGGAAAGGCCTGATCTGGGGCCGCACTCTCTGCACCAATAGTTCAGCCACGGGAAATTTCTCTTGTGTCACCGGTGATTGCGGTTCCGGAAAGATAGCATGTTACGGAAGAACAGCTTCTATGCCGCCGGTCACGCGTCTAGAGTTTTCCTTAAGCGACACCAATTTTCCTGACATTTATGATGTGAGCCTAGCTGTCGGATTCAATGTGCCGGCGATAATTGTTCCCATAAGCAGCAGCAGCAAGTGTAACAGCACGGGGTGTGCGGTCGATATGAATAGAGTGTGTCCGACGGAGCTAAAGACAATAAAAAATGGACAAGTGGTGGGGTGTCAGAACCCCAACCCCTGTATTGGTGATGCGAGTTCCAACTGCGAACCAAGCGTGTACTCGAAAATATTCAAGACTTCATGCCCGCAAGCCTTCAGCTACCCAAAAGACGACCGAACCAGCACGTTCATCTGTTACGATCCTGTCGATTACAACATTGTCTTTTGTCCTACATCTAGCAACAGCCAAAGTGTTGGGGACTCACTCATGGCTGGAAATGGGACATCTCGGTGGCTTTCTCCTTCAGGTGATTTTGCATTTGGGTTTTACCAACTTCCTAATGAGTTTTTCTTGTTGGCTGTTTGGTATGACAAGATGCCAAATAAGACCATTATTTGGTTTGCAAATGGAGACAACCCTGCTCCTATAGGATCAAGGTTAGAACTAAATGACTCTGGACTAGTGCTCAATAACCCCCAAGGTTTAGAGCTATGGAGATCAAATTTTGTATCAGGTACAATTTTTAATGGTCTAATGAACGATGATGGAAATTTTCAACTCTTAGACCAAAATTCTGTGTCACTATGGGAGACTTTCACCCATCCAACTGACACGTTAGTACCTAATCAAGTAATGGAGTTAAATGGAAAACTTTTTTCACGACGAGGAGAGTTTAACTTCTCTCATGGAAGATTCAAACTTCATTTACAAGAGGATGGAAATCTTGTGCTCAGCCTCAATTTGCCTAGCAACTACAGTTATGAGCCTTACTATGATACTGGCACTGCTGATGCTAATAGCCAAACAAATATTGACATGAAATTGATATTTGACAAATCAGGCTTCTTATACATACTGAAAAAAAGTGGGGAGAAGTTTTATATTACCAAGCCAAATGAGACGATCTCAACTAATGACTTCTACTACAAAGCAACGATCAATTATGATGGAGTTTTTACCGTATCATATTACCCCAAAGATCTAAGAAAAGGACAAGGATGGGTCACTACAAAGACTATACCAGAAAATATTTGTTTGAGTTCTACATTCACAGATGGTGAAGGTGTTTGTGGGTTTAATAGCATATGCAATCTCAAAGCTGACCAAAGGCCAATATGTAACTGCCCAGAGAGATATTCTTTAATTGATTCAAATAACATGTATGGTGGTTGCATACCAAAGCTGACCTCTTTCCCAAACCCAAATGGGAAGAAAGATCATGATGTCTTGATCGTTATGTTATCAGTTCTTTTGGCCGGCTCTGTGTTAATCATTTTGATGTTGGTTGGTGCATTATATTTTGGTTTCTCGTGCAACCGCAAGAAGATCGAAAGTAGTAGAACCAACAAAAGTGTTGCTAAAAAGAATTTGCATGACTTTACCTTCAAGGAACTTGTGGAAGCAACAAACAACTTTAGAGAAGAATTGGGAAGAGGATCTTTTAGCATTGTATACAAAGGAACAATAGAGATGACTAGTGTGGCGGTTAAAAAATTAGACAAGTTGTTCCAAGATAATGACAGGGAATTTCAAACTGAGGTGAATGTAATAGGCCAAACTCATCATAGGAACCTAGTTCGTCTACTTGGATATTGCAACGAAGGACAACATCGAATTCTGGTATACGAGTTTATGAGCAATGGCACTTTAGCAAGCTTCCTTTTCTCTTCTTTGAAATCCAATTGGGGCCAACGATTTGACATTGCCCTTGGGATTGCCAGAGGTCTTGTTTACTTGCATGAGGAATGTTGCACCCAAATCATCCATTGCGACATAAAGCCACAAAATATACTTTTGGATGATCAATATAATGCTAGAATTTCAGATTTTGGGTTAGCAAAGCTGTTATTGATCAATCAAAGCCGCACTGAAACTGGAATTAGAGGAACAAAAGGGTATGTTGCACCAGATTGGTTTAGAAGTGCACCAATCACTGCTAAGGTTGACACTTATAGTTTTGGTGTGTTGTTACTAGAGATCATTTGTTGTAGAAAGAATGTAGAAAAGGAGCTTGTTAATGAAGAAAAAGGGATATTGACTGATTGGGCATATGATTGCTACAAGACTAGAAGACTAGAAATTCTTTTAGAAAATGATGACGAAGCTATTAATGACATAAAGAGCTTTGAAAAACTTGTGATGATTGCTATTTGGTGCATTCAAGAACATCCTTCTCTTAGGCCAACAATGAAGAAGGTTTTGCTGATGCTAGAAGGAAATGTTGAAGTTTTAACACCCCCAAGTCCCTACCTTCATGGTTCTATTAGTGAAAATTGA 2748 0.4028 MVQPTWLFSLLILTLQLSASGVNSTKFTLVNQCNYTVWPALSGDDYLSTTGFVLRSGESSTVTPPAKWKGLIWGRTLCTNSSATGNFSCVTGDCGSGKIACYGRTASMPPVTRLEFSLSDTNFPDIYDVSLAVGFNVPAIIVPISSSSKCNSTGCAVDMNRVCPTELKTIKNGQVVGCQNPNPCIGDASSNCEPSVYSKIFKTSCPQAFSYPKDDRTSTFICYDPVDYNIVFCPTSSNSQSVGDSLMAGNGTSRWLSPSGDFAFGFYQLPNEFFLLAVWYDKMPNKTIIWFANGDNPAPIGSRLELNDSGLVLNNPQGLELWRSNFVSGTIFNGLMNDDGNFQLLDQNSVSLWETFTHPTDTLVPNQVMELNGKLFSRRGEFNFSHGRFKLHLQEDGNLVLSLNLPSNYSYEPYYDTGTADANSQTNIDMKLIFDKSGFLYILKKSGEKFYITKPNETISTNDFYYKATINYDGVFTVSYYPKDLRKGQGWVTTKTIPENICLSSTFTDGEGVCGFNSICNLKADQRPICNCPERYSLIDSNNMYGGCIPKLTSFPNPNGKKDHDVLIVMLSVLLAGSVLIILMLVGALYFGFSCNRKKIESSRTNKSVAKKNLHDFTFKELVEATNNFREELGRGSFSIVYKGTIEMTSVAVKKLDKLFQDNDREFQTEVNVIGQTHHRNLVRLLGYCNEGQHRILVYEFMSNGTLASFLFSSLKSNWGQRFDIALGIARGLVYLHEECCTQIIHCDIKPQNILLDDQYNARISDFGLAKLLLINQSRTETGIRGTKGYVAPDWFRSAPITAKVDTYSFGVLLLEIICCRKNVEKELVNEEKGILTDWAYDCYKTRRLEILLENDDEAINDIKSFEKLVMIAIWCIQEHPSLRPTMKKVLLMLEGNVEVLTPPSPYLHGSISEN* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2130 915 Pfam Thaumatin family 31 234 IPR001938 -
Gso15g2130 915 CDD B_lectin 256 359 IPR001480 -
Gso15g2130 915 ProSitePatterns Thaumatin family signature. 85 101 IPR017949 -
Gso15g2130 915 SMART tha2 27 234 IPR001938 -
Gso15g2130 915 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 554 915 - -
Gso15g2130 915 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 156 552 - -
Gso15g2130 915 SUPERFAMILY Protein kinase-like (PK-like) 611 895 IPR011009 -
Gso15g2130 915 Gene3D Phosphorylase Kinase; domain 1 591 701 - -
Gso15g2130 915 SMART blect_4 237 359 IPR001480 -
Gso15g2130 915 SMART serkin_6 627 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2130 915 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Gso15g2130 915 ProSiteProfiles Thaumatin family profile. 24 236 IPR001938 -
Gso15g2130 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Gso15g2130 915 Gene3D Thaumatin 25 234 IPR037176 -
Gso15g2130 915 Gene3D Transferase(Phosphotransferase) domain 1 702 901 - -
Gso15g2130 915 SUPERFAMILY Osmotin, thaumatin-like protein 26 234 IPR037176 -
Gso15g2130 915 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 156 552 - -
Gso15g2130 915 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 554 915 - -
Gso15g2130 915 Gene3D - 237 359 IPR036426 -
Gso15g2130 915 ProSiteProfiles Protein kinase domain profile. 627 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2130 915 Pfam Protein kinase domain 630 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2130 915 Pfam D-mannose binding lectin 287 372 IPR001480 -
Gso15g2130 915 SUPERFAMILY alpha-D-mannose-specific plant lectins 274 419 IPR036426 -
Gso15g2130 915 CDD STKc_IRAK 633 896 - -
Gso15g2130 915 Gene3D - 360 496 IPR036426 -
Gso15g2130 915 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Gso15g2130 915 PRINTS Pathogenesis-related protein signature 50 59 IPR001938 -
Gso15g2130 915 PRINTS Pathogenesis-related protein signature 71 82 IPR001938 -
Gso15g2130 915 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Gso15g2130 915 PRINTS Pathogenesis-related protein signature 224 233 IPR001938 -
Gso15g2130 915 ProSiteProfiles Bulb-type lectin domain profile. 237 357 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2130 Gso-Chr15 49060771 49077250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2130 609 897 Receptor kinase-like Gene Family AT1G60800 43.098 3.41e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso15g2130 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2130 - - gsj:114387079 1853.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g2130 15 49060771 49077250 Gso15g2130 15 49060771 49077250 ECH