Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2128 ATGCCCCTTTCACCCTCTTCCATGGCTTCAATCCCACAATTCTATCCAAACTATACGTTCACCACTCACGATCTTTCCGAGTACCCTGTCCCTCTTCTCAATGGTGGCGGTAATGCCTCGGTTATGGACAGCACCACCATGTGGGGTGGTGGCCAAGATAGCTTGAGTATTCCTGTGCTGGATATGAACAATGGTGCACTTGATCATATTGTGTCGCTTGATTGTGACACCATGGCTTGTGCTGCTAATTGGATGCCTTCGTTTTCGGAGCAGCTCGGGGGGCTCTCGGATTTGGCCATTTCGGACTGCAAAATTGGGTTCTATGGAGGAGGGTTTCAGAGTTTCAATAACAGCAGATCGTACCAACCTCATGTTGGGGAGTTTGGAGATGAATGTTGTGGGTTTGTGGAGGATCTTAAGCCACCTCCTTATCCTAATGCTGCAAGAGAAAACTGGGGAATTGAAGGTAATCAAATGGCAGCAGTTGAGGAGCCTAACATAAAGGTAGGAAGGTACTCAGAAGAAGAGAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTACGCATGTCGGAAAACCTTAGCTGATAGGCGAGTCAGGGTTAGGGGAAGGTTTGCAAGAAACAATGAGCTTTGTGAAGAAGACATGGCAACCAAAAAGCATGAGAATCATCATCACCACAAAGAAGACTTTTATGGTGGCGATTCAATCCAGTTTCAGTTAAAGAACGATGAGGAGGATTGGCTTCAAGAGGCCATGGCAAGTCTAGTGTATTTATCTCATTCTTCACCGGAAGATATGTAA 837 0.448 MPLSPSSMASIPQFYPNYTFTTHDLSEYPVPLLNGGGNASVMDSTTMWGGGQDSLSIPVLDMNNGALDHIVSLDCDTMACAANWMPSFSEQLGGLSDLAISDCKIGFYGGGFQSFNNSRSYQPHVGEFGDECCGFVEDLKPPPYPNAARENWGIEGNQMAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEEDMATKKHENHHHHKEDFYGGDSIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2128 278 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 273 - -
Gso15g2128 278 ProSiteProfiles CCT domain profile. 177 219 IPR010402 GO:0005515
Gso15g2128 278 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 273 - -
Gso15g2128 278 Pfam CCT motif 177 219 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2128 Gso-Chr15 49003227 49005543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2128 173 227 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.63e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso15g2128 CCT 8.7e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2128 - - gmx:102660475 577.4