Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2125 ATGGTATCTTTGGTATGTCAAAAATCAGATGAAGTTACTGAATCACCAGGAAAATATCGTAGTAGGATGGAGAAAGAGGCAATTGAGGGCAAGGGGATGAATGAAGTTCAAGAGCTAAAGGATAACCTTCTACGTAGATATAGCGGTTATATTATTAATCTGAAGCATGAAATTTCCAAAAAGAAGAAGAAAGAAAAACTGCCAAAAGAAGCAAAGCAAATCTTACTTGCATGGTGGAATATTAACTGTAAATGGCCATACCCAACGAAGCAAGGGTCACACAAAGAATGCAAAGCAAACAATCTGCACGGTCATATATTTGATCCTTCACCACGTTGGTCGTCGACGAGGAGATTCTTCACATCAAGTCATGGTGAAAAACGTACGTTGCGCATGTGGCAATACCCAAAGTCACGCAATTTCTCTATATCAACAACAAAATCTTGGACAAGCTATTGA 459 0.3878 MVSLVCQKSDEVTESPGKYRSRMEKEAIEGKGMNEVQELKDNLLRRYSGYIINLKHEISKKKKKEKLPKEAKQILLAWWNINCKWPYPTKQGSHKECKANNLHGHIFDPSPRWSSTRRFFTSSHGEKRTLRMWQYPKSRNFSISTTKSWTSY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2125 152 Gene3D - 47 106 - -
Gso15g2125 152 ProSiteProfiles ELK domain profile. 38 58 IPR005539 GO:0003677
Gso15g2125 152 Pfam ELK domain 38 59 IPR005539 GO:0003677
Gso15g2125 152 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 8 90 - -
Gso15g2125 152 SMART ELK_2 38 59 IPR005539 GO:0003677
Gso15g2125 152 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2125 Gso-Chr15 48933414 48939689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2125 2 90 Homeobox Transcription Factor Family AT1G70510 42.697 8.73e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2125 - - gmx:102660098 296.975