Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g2114 | ATGGTGAAGTTCACAACTCACAGGCTTCGGCACATAATGGACTGCAAACACAATATTCGTAACATGTCTGTTATTGCACACGTCAATCATGGAAAGTCTACCCTCACTGATTCTCTTGTGGCTGCTTCTGGTAATATCATAGCACAAGAGGGTGAAGCTGAGCGTGGCAACACTGTCAAATCCTCTGGTATCTCTCTCTACTATGCGATGCCAGAGGGTGATTTGAAGAATTTCAAAGGGGAACGTGAAGGGAAGGAGTTCCTTATAAATCTCATTGACTCACCAGGGCATGTGGACTTCTCATCTGAGGTCACAACCGCACTTCGCATCACCGATGGAGCACTTGTGGTGGTGGATTGTGTTGAGGGTGTCTGTGTCCAGACCGAAACTGTGCTGAGACAAGCCCTTGGAGAAAGGGTTAAGCCTGTTTTGGCTCTTAACAAGATGGATAAGTGCTTTCTTGAGCTCAATCTTGATCCAGAGGAGGCATACCTAACACTCCAAAGGGTTGTTGAGAGTGTGAATGTAATCATGGGTAACTATGAAGATGCTCTACTTGGAGATGTTAAGGTGTACCCTGAGAAGGGAACGGTTGCCTTTTCCGCTGGCTTGCATGGATGGGGCTTTACACTCACCAACTTTGCCAAGATGTATGCTTCCATGTTTGGAGTTGATGAGGCCAAGATGATGAGTAGGCTTTGGGGTGAGAATTTCTTTGACTCTGCTACCAAAAAGTGGACCAACAGGCACACTGGGGCTTCTACTTGCAAGCGTGGCTTTGTTCGGTTTTGTTATGAACCAATCAAGCAGGTTATTGAACTCTGCATGAATGACCAGAAGGATAAGTTGTGCCCCTTGTTGCAAAAGCTTGGGTTGAACTTGAAGTTCGAGAAGGAGTTGACAGGGAAGGCTTTGATGAAGTGTGTTATGCAAAGTTGGCTCCCAGCAAGTAGTGCCATTCTGGAGATGATGATATTTCACCTTCCATCTCCGGCTAGTGCTCAGAAATATAGAGTTGAGAATTTGTATGAGGGTCCCCTTGATGACCCTTACGCTTCTGCTATCAGAAATTGTGACCCTGAAGGGCCCCTAATGCTTTATGTGTCAAAGATGATTCCTACATCTGATAAGGGAAGGTTTTATGCTTTTGGCCGAGTCTTCTCTGGGAAGGTGTCAACTAATATGAAGGCTAGAATTATGGGGCCAAATTTTGTTCCTGGGGAGAAGAAAGACCTGTATGTGAAGAGTGTTCAGGGGACTTCAATTTGGATGGGGAAGAAATATGAAACAGTTGAGGATGTTCCTTGTGGAAACACAGTTGCCTTGGCTGGTTTGGACCATTTCATCACCAAGAATGCTACTATAACAAATGAGACAGAAATTGAAGCACACCCCATTAGAGCTATGAAGTTTTCTGTGTCACCATTGGTAAGTGTAGCTGTTAACTGCAATGCTGCATCAGATCTTCCTAAGCTTGTTGAGGGCCTAAAACGTTTGGCAAAGTCAGACCCCATCATGATGTGCACAATTTCAGAAACTGGAGAACACATCATAGGTGCTACTGGTGAGCTGCATCTTGAAACATGCGTAAAAGACTTGAAGGACGATTTTATGAATGGGATTGAGATTTCAATATCTGACCCTATTGTCTCCTTCAAGGAGACAGTGCTGGAGAAGTCTTGCCACACTGTGATGAGCAAATCACCTAACAAACACAACCGTTTGTACATGGAAGCAAGGCCAATGGAGGAAGGGCTTGTGGAGGCCATTGAGAGAGGCAAGATTGGTCCAAAGAATAACAACAAAATGGTGTGTGAAGAGTTTGGTTGGGACAAGGATCTAGCCAAGAGAATATGGTGTTTTGGCCCTGATACCATTGGACCCAACATGATGGTGGATGCATGTAAGGGAGTTCAGTACCTCAATGAAATGAAGGAGGCTGTTCTTGCTGGCTTTCAGATAGCATCAAGAGAAGGTCCACTTGCAGAAGAGAACTTGAGAGGGGTATGCTTTGATCTTTGTGATGTTGTACTTCATGCTGATACAATCCATAGGGGAGGTGGCCAAATCATTCCAACTGCTAGAAGGGCTTTCTATGCTGCCATACTTTCAGCTAAGCCAAGACTACTTGAGCCTGTGTATGTGATGGAAATACAAGCACATGAAAAGGCTCTTGGTGGCATCAATAGTGTTGTTAACAAGAAAAGAGGGCATGTGTTTGAGGAAATTCAGAGGCCTGGCACCCCATTTTACAATGTCAAGGCATATATACCAGTGATTGAGTCATTCAAATTCAGTGAAACACTGAGGACTCAAATTGGAGAGCAGGCTTTCCCACAGATGGTGTTTGATCACTGGGATATGGTGCAGTCTGATCCACTGGAACCTGGAACACCAGCTTCTGCATGTGTTGCTGACATTCGGAAGAAGAAAGGGTTGAATGAACAAGTTATGCCTTTGTGTGTGTTCGAGGACATGCTTTGA | 2484 | 0.4477 | MVKFTTHRLRHIMDCKHNIRNMSVIAHVNHGKSTLTDSLVAASGNIIAQEGEAERGNTVKSSGISLYYAMPEGDLKNFKGEREGKEFLINLIDSPGHVDFSSEVTTALRITDGALVVVDCVEGVCVQTETVLRQALGERVKPVLALNKMDKCFLELNLDPEEAYLTLQRVVESVNVIMGNYEDALLGDVKVYPEKGTVAFSAGLHGWGFTLTNFAKMYASMFGVDEAKMMSRLWGENFFDSATKKWTNRHTGASTCKRGFVRFCYEPIKQVIELCMNDQKDKLCPLLQKLGLNLKFEKELTGKALMKCVMQSWLPASSAILEMMIFHLPSPASAQKYRVENLYEGPLDDPYASAIRNCDPEGPLMLYVSKMIPTSDKGRFYAFGRVFSGKVSTNMKARIMGPNFVPGEKKDLYVKSVQGTSIWMGKKYETVEDVPCGNTVALAGLDHFITKNATITNETEIEAHPIRAMKFSVSPLVSVAVNCNAASDLPKLVEGLKRLAKSDPIMMCTISETGEHIIGATGELHLETCVKDLKDDFMNGIEISISDPIVSFKETVLEKSCHTVMSKSPNKHNRLYMEARPMEEGLVEAIERGKIGPKNNNKMVCEEFGWDKDLAKRIWCFGPDTIGPNMMVDACKGVQYLNEMKEAVLAGFQIASREGPLAEENLRGVCFDLCDVVLHADTIHRGGGQIIPTARRAFYAAILSAKPRLLEPVYVMEIQAHEKALGGINSVVNKKRGHVFEEIQRPGTPFYNVKAYIPVIESFKFSETLRTQIGEQAFPQMVFDHWDMVQSDPLEPGTPASACVADIRKKKGLNEQVMPLCVFEDML* | 828 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g2114 | 827 | CDD | EF2_snRNP_III | 475 | 547 | - | - | |
Gso15g2114 | 827 | Gene3D | - | 704 | 813 | - | - | |
Gso15g2114 | 827 | SUPERFAMILY | Translation proteins | 330 | 465 | IPR009000 | - | |
Gso15g2114 | 827 | CDD | aeEF2_snRNP_like_IV | 547 | 714 | - | - | |
Gso15g2114 | 827 | Gene3D | - | 3 | 225 | IPR027417 | - | |
Gso15g2114 | 827 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 17 | 332 | IPR000795 | GO:0003924|GO:0005525 | |
Gso15g2114 | 827 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 473 | 551 | - | - | |
Gso15g2114 | 827 | CDD | EF2_II | 363 | 458 | - | - | |
Gso15g2114 | 827 | PRINTS | GTP-binding elongation factor signature | 21 | 34 | IPR000795 | GO:0003924|GO:0005525 | |
Gso15g2114 | 827 | PRINTS | GTP-binding elongation factor signature | 90 | 100 | IPR000795 | GO:0003924|GO:0005525 | |
Gso15g2114 | 827 | PRINTS | GTP-binding elongation factor signature | 106 | 117 | IPR000795 | GO:0003924|GO:0005525 | |
Gso15g2114 | 827 | PRINTS | GTP-binding elongation factor signature | 142 | 151 | IPR000795 | GO:0003924|GO:0005525 | |
Gso15g2114 | 827 | Pfam | Elongation factor G, domain IV | 598 | 706 | IPR005517 | GO:0005525 | |
Gso15g2114 | 827 | Gene3D | Translation factors | 331 | 472 | - | - | |
Gso15g2114 | 827 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 550 | 710 | IPR020568 | - | |
Gso15g2114 | 827 | Pfam | Elongation factor G C-terminus | 708 | 794 | IPR000640 | - | |
Gso15g2114 | 827 | CDD | eEF2_snRNP_like_C | 711 | 789 | - | - | |
Gso15g2114 | 827 | Pfam | Elongation factor Tu GTP binding domain | 17 | 330 | IPR000795 | GO:0003924|GO:0005525 | |
Gso15g2114 | 827 | TIGRFAM | small_GTP: small GTP-binding protein domain | 20 | 163 | IPR005225 | GO:0005525 | |
Gso15g2114 | 827 | SMART | EFG_IV_2 | 593 | 706 | IPR005517 | GO:0005525 | |
Gso15g2114 | 827 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 4 | 329 | IPR027417 | - | |
Gso15g2114 | 827 | CDD | EF2 | 20 | 219 | - | - | |
Gso15g2114 | 827 | Pfam | Elongation factor Tu domain 2 | 381 | 455 | IPR004161 | GO:0005525 | |
Gso15g2114 | 827 | SUPERFAMILY | EF-G C-terminal domain-like | 711 | 813 | IPR035647 | - | |
Gso15g2114 | 827 | SMART | EFG_C_a | 708 | 797 | IPR000640 | - | |
Gso15g2114 | 827 | Pfam | Elongation Factor G, domain III | 475 | 537 | IPR041095 | - | |
Gso15g2114 | 827 | PANTHER | TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT | 1 | 826 | - | - | |
Gso15g2114 | 827 | SUPERFAMILY | EF-G C-terminal domain-like | 472 | 548 | IPR035647 | - | |
Gso15g2114 | 827 | Gene3D | - | 557 | 703 | IPR014721 | - | |
Gso15g2114 | 827 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 1 | 826 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g2114 | Gso-Chr15 | 48770527 | 48774016 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso15g2114 | 1 | 827 | Eukaryotic Initiation Factors Gene Family | AT1G56070 | 74.526 | 0.0 | 1336 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g2114 | K03234 | - | gmx:100790826 | 1657.88 |