Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2101 ATGAAATCCAGCAGAGAGAAAGAGAAAGAGAACGATCGCTGCATCAGTTCTCATATGCAGACCCTCCATCGCCGTCTTCTCCACGCCTTAAACCTTGGCACCAGACATTTTGATGAGAAGACAAATAGATGGAATTGGCAGTGTGCCAACATTGAAGTGCAGAAAAATGTGCTGCGATCAATTGGTGCGTTTCTTGATTCATTATCGGGAGATGCACGTGCTGCACGTCATGCTATTGTTAAGGAATCTGTTGCTGATAGTATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCTTTGTTAAGCATGGCATCAAATGTGGCAGTGAAGTTAGTTAGTTCTATACCTAATTCATTATTGCAATTGCATATGTTGGATCTTGTTTATTGTCTGTCATCCTTGTTATCTTCGCATCAAGTAGAAGTTGCAACACCCTGTGCTATTGCTTTGAATTTGGTAATCTCAAATTTGAGTGCTACAAGTGAGAAGGCAGTTATGGAAGCATTGAACGAAACAGAGACTTCCATACGTATAGTCAGAAATATAAATTTTTTTGCTGAAGATGCAAAGAAAATTGAATATTTCAAAGAGATGACTTTGCTTTTGAGCGCAATACTGTGGCGCTGGCCTCCATCTAGGTTCTCTGTTGGTAATGATGTTATACTTATGAAAGGCTTAGCAAACATCCATACAAGGACAGAGAGTTCTATTAAAATTGCACTTTTAAAGCTGTACACATCTCTAGCTTTATGTGATTCTGTAGCAAGAAAACTTATAGAGGATGGAGAAGGATTTCCACAGATGGTTGTGCAGGCAATGGGAAAATCAAACCCTCATGCTGTTCAGATAGAGGGGTTTAGGCTTGCTCAATGTCTATTGAGATCCCAAGAGAATTGTTTAGAAGTGGTTGGTCTGTGTGGTGAAGCCCTTGTTGATGCAATAATTTGTGGGATGAAAGAAACTGGGCTGAGTTCTAAAAAAATTGGGAACAACCATGGGTCTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCAGGTGATCATCATATCAATTTTTGGAAACAAGGAATTGATAGAATTCTCCTTAATCTTCTGATTGAAAATATTCAAGACCAATTGTCTGAGCCTGTCTTGTCATTGGAAAAACAAATATCCATGGCAAAAGAGGGATTAAAAGCCAATTATCATCTTGGTCTTAGGAGTTATCTGTGGGACATTCTTGGGTGGCTTACTATTCATTGTGGAGAAAATTTAAACCCTTATACTCATGGAAGCGAGCTCTGCATCAACTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCCGAATATGTCAAAAGGATATTGATGATCATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTCATTCTCCATGTAATACCATCTCCTCGTATGCTAGATTCTTATTATTAGATGCACTTGAGGTGAAAGGCTTGTCATGCTTGAAAAGCTTAATACATACTCTAGATTATACATCATCCCTAGAAAGCTATGGATCATTTGATAAACTTCAACTGGTTATTAACTTAATTGGGTTGACTTGTCTTTCAAGTTTACCAGAGTATCAAAGCTGTATCATAGAGAGCAAAGGGATAAAAGCAATTGTTCTTCTTGTGAAACGATGCTTAAGTAATGATATTCATGTAGAAAGGCGAAACTTCACTCCTCATTTGCACACAACATTCCAGGAAAGGTCTTGTTGCTGTATGGATAAAGAAGATTGGGAAGGTTCCAATGTTCTCTTATTTTATAGTTTGTTGGGATTGTCTGAAATTCTTCGTCAGTGTGACCTTCTACAAGATAATTCTCAGCAATATTCTAGAGAGGTGACAAATATTAGAGCTCAGTTAGTTAGCAAACTTCATGAGATCTGTAGTGGCAACTCTTTCAGTCCTGGAGTGAGATGGTATGTTTTGTATATTCTAACTTATTTTGGATTTTACGGTTTCCCAAATGAGTTAGCCAAAAGGATTGGGAAATCTCTCAATAAGGAAGAATACTCAGATATGCGGCTCGTTGTAGCAAATGGGGTGTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTGCTGCCTCCTCAATTGTTACCTAGTATGAAGAATTCTGAAAAGGTAACAGATAAGTTTGTCAGAGAGACCATGAGAGAAGTTCAATTATCTTCTCATGTTGATTATGAAGCATTGGTGTTGTTGTTGGAATATGTATACTTGGGATGTTTACATGCAGGAGAAGAAACAGTGAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAAACTACAGCATCTCCTGCAAATGCTTTATAGACAACGTCCAAAGTGGGGCACACCTTTCCCCAGCTTTAATCTTACTCCATCTCTTGGTTCAGCCGGAAGTTGTTTTTCGGATGTTATATTGGAAGCTAAATCAAATAAACTTGTTGGGTGGACATGCAACATTTGTTCTGACACAGTGCCCCATATGCATGTTCACAAAGTTATATTGCAGTCTGGTTGTGATTATTTACAAGGTTTATTCCGGTCAGGAATGCGAGAAAGTCATTCACAAGTCATAAAAGTTGATATTAGCTGGGAAGCATTGATCAAACTAGTGCAGTGGTTTTATTCTGATGAGCTGCCTAATCCTCCCTCTGGATGCTTGTGGGATAATATGGATGATGAAGAAAAGCTATTCAATCTACAACCATATGTGGAGCTTTGTTGGCTTGCTGAGTTCTGGATTTTGGAAAATATTCAGGAAGCCTGCTGGGATGTGATTATGTCTTGTCTTGATTCTTCCAGTCAGTTGCCCATTAAAATAATCAAAATGGCATATAATCACTCTTTGTGGAAGTTGGTTGACGTTGCAGCAAATCTCATGGCTCCTTCATATCATCAATTACAAAATTCTGGTGATTCAATATTTCCTCAAGATGATTCATAG 3003 0.3853 MKSSREKEKENDRCISSHMQTLHRRLLHALNLGTRHFDEKTNRWNWQCANIEVQKNVLRSIGAFLDSLSGDARAARHAIVKESVADSILGALLWILQCKSEALLSMASNVAVKLVSSIPNSLLQLHMLDLVYCLSSLLSSHQVEVATPCAIALNLVISNLSATSEKAVMEALNETETSIRIVRNINFFAEDAKKIEYFKEMTLLLSAILWRWPPSRFSVGNDVILMKGLANIHTRTESSIKIALLKLYTSLALCDSVARKLIEDGEGFPQMVVQAMGKSNPHAVQIEGFRLAQCLLRSQENCLEVVGLCGEALVDAIICGMKETGLSSKKIGNNHGSLSVEACQLALITRWAGDHHINFWKQGIDRILLNLLIENIQDQLSEPVLSLEKQISMAKEGLKANYHLGLRSYLWDILGWLTIHCGENLNPYTHGSELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVSRAVLMMIHSPCNTISSYARFLLLDALEVKGLSCLKSLIHTLDYTSSLESYGSFDKLQLVINLIGLTCLSSLPEYQSCIIESKGIKAIVLLVKRCLSNDIHVERRNFTPHLHTTFQERSCCCMDKEDWEGSNVLLFYSLLGLSEILRQCDLLQDNSQQYSREVTNIRAQLVSKLHEICSGNSFSPGVRWYVLYILTYFGFYGFPNELAKRIGKSLNKEEYSDMRLVVANGVSVSVHGVILAVRCPSLLPPQLLPSMKNSEKVTDKFVRETMREVQLSSHVDYEALVLLLEYVYLGCLHAGEETVKKLKILAKRCKLQHLLQMLYRQRPKWGTPFPSFNLTPSLGSAGSCFSDVILEAKSNKLVGWTCNICSDTVPHMHVHKVILQSGCDYLQGLFRSGMRESHSQVIKVDISWEALIKLVQWFYSDELPNPPSGCLWDNMDDEEKLFNLQPYVELCWLAEFWILENIQEACWDVIMSCLDSSSQLPIKIIKMAYNHSLWKLVDVAANLMAPSYHQLQNSGDSIFPQDDS* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2101 1000 SUPERFAMILY ARM repeat 47 737 IPR016024 -
Gso15g2101 1000 Gene3D Potassium Channel Kv1.1; Chain A 817 990 IPR011333 -
Gso15g2101 1000 Coils Coil 613 640 - -
Gso15g2101 1000 SMART BTB_4 692 802 IPR000210 GO:0005515
Gso15g2101 1000 SMART BTB_4 822 950 IPR000210 GO:0005515
Gso15g2101 1000 PANTHER OS06G0674800 PROTEIN 1 992 IPR044953 -
Gso15g2101 1000 SUPERFAMILY POZ domain 671 794 IPR011333 -
Gso15g2101 1000 Pfam BTB/POZ domain 684 793 IPR000210 GO:0005515
Gso15g2101 1000 Pfam BTB/POZ domain 847 912 IPR000210 GO:0005515
Gso15g2101 1000 CDD BTB_POZ_ZBTB_KLHL-like 821 899 - -
Gso15g2101 1000 ProSiteProfiles BTB domain profile. 692 772 IPR000210 GO:0005515
Gso15g2101 1000 SUPERFAMILY POZ domain 847 947 IPR011333 -
Gso15g2101 1000 Gene3D Potassium Channel Kv1.1; Chain A 674 797 IPR011333 -
Gso15g2101 1000 ProSiteProfiles BTB domain profile. 822 903 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2101 Gso-Chr15 48546745 48555610 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso15g2101 BTB 4.2e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2101 - - gmx:100786565 1991.85