Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2091 ATGGCTTCCGAGAACGTAAGCCCCGAGACAGTATCCAAAGCCGTCGATGCTCTCCTCCAATGGCGCCGCTCCCAATCGGAGATTCAGAAACCAAAACTCTTGGGCGAAGACGAAGAATTCGTGTACCTGATCCTCACGCTGAAGAAGATCCCTTCAAAATCCCGAGTTAACCCTCACAAGATTCCTCTCCCGCACTCCCTCATCTCCCCTTTCTCCGAGCAGTGCCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTCACCAAAGCCCAGGCCCAAGCCAAAATCCAGTCCGAATCCATCCCCGTCCACAAAGTCCTCAAGCTCTCGAAACTCGCCTCCGATTACCGCCCCTTCGAGGCGAAGCGAAAACTCTGCGATTCTTATGATTTGTTTTTTGCAGAGAAGAGCATTGTGCCGCTCCTGCCGCGGCTTCTGGGGAAGAGTTTTTTCAAGAAGAGGAAGATTCCGGTGCCGGTGGACCTGAAGAAGGGGAGCTGGAAGGAGCAGGTGGAGAGGGCCTGCTCGTCCGCGATGCTGTTCATGAGGACGGGGACCTGTAGTGTGGTTAGGGTTGCCAAGGTGAGGATGGAGAGGGATGAGATTGTGGAGAATGTCGTTGCCGCGATTGAGGGGATTGTGGAGGTTGTGCCCAAGAAGTGGGGCAATGTGAGGTCGCTGCATTTGAAGCTGCTGGAGAGCGTGGCTCTGCCGGTCTACCAGACTGTTCCTGATGTGAAGTTGAAGATTGAGGGATTTAAGGTTGAGGAGAAGAAGAAGGAGAAGGAGAGGGATGGTGAGGTTAGTGATTCGATCGAGGGAGGGACGGAGAAGAAGAAGAAGAAGAAGGGGAGGATTCATGAGGTTAGGTATATGGATGAGAATGTTGTGGAGGCTGGGATGGAAGATGAATTGGCGAGTGATGACGATGATAGTGAAGATGAGATGGTGAGTAAGAAGAGGAAGAAAGGGGTTTCGAGTGAGTTGAGTGGTGTTGAGCAATTGAAGAAGTTGGTATTTAATGAGTTGAGTGCCAATGGGAAGAAGAAGTCAAAGAAGGGCTGCTTGTCTGTTGGGAAGGGGGTTAAGGGAGGTTTGATTGAGGGGAGTGGAAGTGAATTGGTTGTGAAGGATGAGGAGTCGGGGGTGAAGAAGAAGAAGAAGAAGAGAGGGGATGTGAAGGCTACGAAAAGTGTAAAGGCTAAGATAATTAAGAAGGCTGTGTGA 1227 0.5159 MASENVSPETVSKAVDALLQWRRSQSEIQKPKLLGEDEEFVYLILTLKKIPSKSRVNPHKIPLPHSLISPFSEQCLILDDRPNKARVTKAQAQAKIQSESIPVHKVLKLSKLASDYRPFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKGSWKEQVERACSSAMLFMRTGTCSVVRVAKVRMERDEIVENVVAAIEGIVEVVPKKWGNVRSLHLKLLESVALPVYQTVPDVKLKIEGFKVEEKKKEKERDGEVSDSIEGGTEKKKKKKGRIHEVRYMDENVVEAGMEDELASDDDDSEDEMVSKKRKKGVSSELSGVEQLKKLVFNELSANGKKKSKKGCLSVGKGVKGGLIEGSGSELVVKDEESGVKKKKKKRGDVKATKSVKAKIIKKAV* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2091 408 MobiDBLite consensus disorder prediction 259 280 - -
Gso15g2091 408 CDD Ribosomal_L1 11 239 IPR028364 -
Gso15g2091 408 Pfam Ribosomal protein L1p/L10e family 36 235 IPR028364 -
Gso15g2091 408 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 5 298 - -
Gso15g2091 408 Gene3D - 85 177 IPR016095 -
Gso15g2091 408 MobiDBLite consensus disorder prediction 259 279 - -
Gso15g2091 408 MobiDBLite consensus disorder prediction 301 325 - -
Gso15g2091 408 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 298 - -
Gso15g2091 408 SUPERFAMILY Ribosomal protein L1 36 240 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2091 Gso-Chr15 48440931 48442589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2091 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 3.94e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2091 K14775 - gmx:100782862 681.019