Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2086 ATGACTTGTTTTCCTTTATTATTCAGTAAGTCGTCTTCTTCAGCGAGACACGATCCAGAAATTGATGAAGGCATTCATAATGTTAAACTCTACGCCTACAAACAACTAAGAAATGCCACTGAAAAGTTTAGTCCAGCCAATAAAATTGGAGAGGGTGGTTTTGGTTCTGTCTACAAGGGACGGCTTAAAGATGGAAAAGTTGCTGCAATAAAAGTTCTTTCAGCTGAATCAAGACAAGGGGTGAAGGAATTCTTGACAGAGATTAATGTGATCTCCGAGATAGAGCATGAAAATTTGGTCAAGTTATATGGTTGCTGTGTGGAAAAAAATAACAGAATATTAGTCTACAATTACCTTGAGAACAACAGCCTATCACAAACTCTTCTAGGTGGAGGTCACAATAGTCTCTACTTTGATTGGGGAACTCGATGTAAAATATGCATTGGGGTTGCACGTGGGCTTGCCTATCTTCATGAAGAAGTGAGGCCTCATATTGTTCATAGGGATATAAAAGCAAGCAATATCCTCCTTGACAAAGATCTTACACCCAAGATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCAAACATGACTCATGTCAGCACACGTGTAGCAGGAACATTAGGTTATTTGGCACCAGAGTATGCGATAGGGGGGAAGCTAACAAGGAAAGCAGACATTTACAGCTTTGGCGTCCTCCTTGCGGAAATTATCAGTGGAAGATGTAACATAAACTCACGATTACCAATAGAAGAACAATTTCTTCTGGAGAGGACATGGGACCTTTATGAGCGAAAGGAATTGGTTGAACTGGTGGATATATCACTAAACGGGGAATTCGATGCTGAGCAGGCTTGTAAGTTTCTGAAGATTAGCCTTCTTTGCACTCAAGAATCCCCGAAGCTCCGGCCATCGATGTCTTCTGTGGTCAAGATGCTCACTGGAAAAATGGATGTTAATGACAGTAAGATAACAAAACCTGCCTTAATTTCTGATTTTATGGACCTTAAAGTTAGAAGGAACGAAGAAAGTAGTATTGATATGAAGAATTCATCTATGTATACAACCTCTTCTTCAGACAACCATGATAGTACCATGTCATTTGCCACAACTACTACCTTTGCAGCAATATATGATGAAAGCATGTAA 1152 0.3967 MTCFPLLFSKSSSSARHDPEIDEGIHNVKLYAYKQLRNATEKFSPANKIGEGGFGSVYKGRLKDGKVAAIKVLSAESRQGVKEFLTEINVISEIEHENLVKLYGCCVEKNNRILVYNYLENNSLSQTLLGGGHNSLYFDWGTRCKICIGVARGLAYLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTLGYLAPEYAIGGKLTRKADIYSFGVLLAEIISGRCNINSRLPIEEQFLLERTWDLYERKELVELVDISLNGEFDAEQACKFLKISLLCTQESPKLRPSMSSVVKMLTGKMDVNDSKITKPALISDFMDLKVRRNEESSIDMKNSSMYTTSSSDNHDSTMSFATTTTFAAIYDESM* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2086 383 SUPERFAMILY Protein kinase-like (PK-like) 23 314 IPR011009 -
Gso15g2086 383 PANTHER - 2 373 - -
Gso15g2086 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Gso15g2086 383 Gene3D Transferase(Phosphotransferase) domain 1 119 330 - -
Gso15g2086 383 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 373 - -
Gso15g2086 383 ProSiteProfiles Protein kinase domain profile. 43 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2086 383 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2086 383 Gene3D Phosphorylase Kinase; domain 1 13 118 - -
Gso15g2086 383 CDD STKc_IRAK 49 316 - -
Gso15g2086 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Gso15g2086 383 SMART serkin_6 43 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2086 Gso-Chr15 48348810 48353105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2086 31 367 Receptor kinase-like Gene Family AT1G53440 52.663 2.07e-111 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g2086 Pkinase 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2086 - - gmx:100782320 753.051