Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2079 ATGAAGGATAATAATCAATGGTGTCTCTATGACCATGACCCACTTCTTCTCACAGACGTTTCTTTGCAACAAGAATCCTCTTCTTATACTCACTGCTCCAGTTCTCTTTCACAAGCATCACTGAGCTCTCGGAGTTTGGCTATGGCGGACAAGCCTGTGTCTCGCGGTGACAGCCCCAGCATTGGGTTTTCTCAGGAAAATGGAAGATTTGAAGGGAACAGCGTGAAATTCGATGACCCAATTGTGAAAAATGTGTTTGATGGAAGATCAATTTTGGGGTATTCTCTTACATCCCCAGATTTGGTCATTTGTGGCTCACCAGATATTGCTGGAATCAGCTATGGTGATTCCCCTGAGTTGTTGAAGAACAAACATTCCAAGGATGTGGAGCAATCTATGGAGCTTTCTCTAGAGTATGGAATCAAGGGGTCTCAAGTTGAAGCTGACAATGGCCATAAGATCCCAACCGTTAAATTCTCAAACTTTTGTCAAGCTTTTGAGCAAGAGGAAGAGCTGCTATCCCCTGAAGCCTCCTTTGAGCTTCTTCCACCTCTTGTAACCAAGAATGAGTCACCCCAAGATCTCCCTCTTAGAGATACTGAGATGCTAGAAGACATTGGAGTGTCTCAGGAGGCAGAAATGGAGTCCTCCGAAGATACCGAGGATATTGGGATGGAAGCGAAGTTTAAGAGGCTGAAAAGAGACTTTGACAGTCAGAGAAAGGAGCTGACGGAAACAAGGAGGGAGTTGGGGGAGATCAAGAGAGAGAATCAACAGAAGAGTAGAGAATGCCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAAAATGAGCTAATGCGCAAGTCCATGCATGTAGGATCTTTGGCATTTGCCATTGAGGGGCAAGTGAAGGAGAAAAGTAAGTGGTTTTCATCACTGAGAGACTTGACGAGGAAATTGAAGATTATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCAAGCAAAAAATATCAAGCAGATATGAGAGAAATGGGGCTTATTATTAAGTCCAAAATAAATGAACAGCTGGAGTCACATGAAGATCTCAAGTCCAAATATATTGAAGGGGCTACGGAACGGAAAGATCTTTACAATAAGGTTTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGTTGTAGGCCTCTCAACACCGACGAGATATATGCAGGAGCAACAGTGGCCTTAGATTTTGAATCTGCGAAAGATGGTGATTTAACTGTAATGTCAAATGGAGCTCCTAAGAGGACTTTCAAGTTTGATGCTGTCTTTGGTCCCCAAGCTGAGCAAGCTGATATTTTTAAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGGTTCAATGTATGCATTTTTGCATATGGTCAGACTGGGACAGGAAAAACTTTCACAATGGAGGGCACAGAAGAGGCTCGAGGTGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAGGAGAGGCAGAAGCTCTACTGTTATGATATTTCTGTAAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTAGCAGGAAATCATCCAGGAACAGCTGCAAAAAGACTTGAGATAAGGCAAGCTGGTGAAGGAATGCATCACATTCCAGGGTTGGTTGAGGCACATGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACCGGTAGCAATGCGAGGGCAGTAAGCTCAACCAATTCCAATGAGCATAGCAGCCGATCTCACTGCATTCACTGTGTTATGGTTAAGGGGGAGAATTTGTTGAATGGGGAATGCACGAGAAGCAAGCTATGGCTGGTGGACCTAGCAGGCAGTGAGCGAGTAGCAAAGACAGAAGTGCATGGCGATAGACTAAAGGAGACACAAAATATTAATAGGTCTCTCTCTGCACTTGGTGATGTCATATCAGCTCTTGCAACAAAAAGTTCACACATTCCTTTCAGGAACTCCAAGCTTACACACTTACTACAAGACTCATTAGGAGGAGACTCAAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAATGATTTGAGTGAGACAATTTGCTCTCTGAACTTTGCTAGTAGAGTAAGAGGAATAGAATTGGGACCTGCAAGAAAGCAGTTAGACACTGTTGAACTTTTGAGACACAAACAAATGGTTGAGAAAGTCAAACAAGAGGTAAGGCTGAAAGATTTGCAAATCAAGAAGCTGGAGGAAACAATCCATGGATTGGAGTCCAAGATGAAGGAAAGAGACAGTAAGAACAAAAATCTCCAAGAGAAGGTCAAGGAACTGGAATCACAACTTCTGGTTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAACAGCACCAAATGAAACATCAAGAAGAGCAAAACAATACACTTCTGAGACCAGCACTTGCAAGTAGACCACTAGGAAGTCTCAAGAATTTCAATGATCCAGTTAGTGGTGGGTGGTTCAAAGACCAACAAATAAATTCAGCTAAACCACTCACTGAGAACAACATCTTGAAACCTTGTATACCTTTTTCTACAATGGAGAGCTCCATCAAGTGCATTGATCATGCTGAGAAAGAAAACAATCCTGACATGGCTGACAAAGCCCTACTGCCAAAAAGGCCTGGAAGAGCTTCTATCTGCATGATGACACCGCGTGTTCCTTCAGCTGTTGCTTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATACCTAGCTTAACACAGTTCCAATCACCATTATTACCAAAGTTAACAAACCAATTTGATCAGAAGGATGCCAATGGGGAATCAGAAACCAACTGTGTGCCTGCACAGACTCATTGTGAGAGTCCCAAAGAAGTTAGAAGTGGTGCTAAGAGGATTGGTAGCATACTAAGAAGAAGCCTTCACAAGAAAATACAGGTTAAGTCTCCACTTCAGCAGCACATGAGGAAGGTTGGTGTAAATGTAGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGTAGGGGGAGATTGGCACCAAGGGGGCAAGTAGGATCTGGTAGAAGAGGAGGAGCTAAAGATATTCAACAAAAGAATAGTCAAAAGGAGAAGGAAAGGGGATGGATATAA 3132 0.4285 MKDNNQWCLYDHDPLLLTDVSLQQESSSYTHCSSSLSQASLSSRSLAMADKPVSRGDSPSIGFSQENGRFEGNSVKFDDPIVKNVFDGRSILGYSLTSPDLVICGSPDIAGISYGDSPELLKNKHSKDVEQSMELSLEYGIKGSQVEADNGHKIPTVKFSNFCQAFEQEEELLSPEASFELLPPLVTKNESPQDLPLRDTEMLEDIGVSQEAEMESSEDTEDIGMEAKFKRLKRDFDSQRKELTETRRELGEIKRENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFSSLRDLTRKLKIMKMEHIKLLEEAEASKKYQADMREMGLIIKSKINEQLESHEDLKSKYIEGATERKDLYNKVLELRGNIRVFCRCRPLNTDEIYAGATVALDFESAKDGDLTVMSNGAPKRTFKFDAVFGPQAEQADIFKDTAPFATSVLDGFNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQKLYCYDISVSVLEVYNEQIRDLLVAGNHPGTAAKRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNSNEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKQLDTVELLRHKQMVEKVKQEVRLKDLQIKKLEETIHGLESKMKERDSKNKNLQEKVKELESQLLVERKLARQHVDSKIAEQHQMKHQEEQNNTLLRPALASRPLGSLKNFNDPVSGGWFKDQQINSAKPLTENNILKPCIPFSTMESSIKCIDHAEKENNPDMADKALLPKRPGRASICMMTPRVPSAVASRRNSLIPLPSIPSLTQFQSPLLPKLTNQFDQKDANGESETNCVPAQTHCESPKEVRSGAKRIGSILRRSLHKKIQVKSPLQQHMRKVGVNVGMEKVRVSIGSRGRLAPRGQVGSGRRGGAKDIQQKNSQKEKERGWI* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2079 1043 PANTHER KINESIN-LIKE PROTEIN KLP-3 216 1031 - -
Gso15g2079 1043 CDD KISc_C_terminal 380 710 - -
Gso15g2079 1043 Gene3D Kinesin motor domain 324 710 IPR036961 -
Gso15g2079 1043 ProSiteProfiles Kinesin motor domain profile. 382 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 ProSitePatterns Kinesin motor domain signature. 608 619 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso15g2079 1043 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 216 1031 - -
Gso15g2079 1043 SMART kinesin_4 380 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 Coils Coil 729 784 - -
Gso15g2079 1043 Pfam Kinesin motor domain 388 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 PRINTS Kinesin heavy chain signature 578 595 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 PRINTS Kinesin heavy chain signature 609 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 PRINTS Kinesin heavy chain signature 658 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g2079 1043 Coils Coil 306 326 - -
Gso15g2079 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 746 IPR027417 -
Gso15g2079 1043 Coils Coil 229 277 - -
Gso15g2079 1043 MobiDBLite consensus disorder prediction 1006 1043 - -
Gso15g2079 1043 MobiDBLite consensus disorder prediction 1029 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2079 Gso-Chr15 48249323 48254725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2079 357 735 Calmodulin-binding Proteins AT5G65930 41.388 1.91e-79 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2079 K10406 - gmx:100779622 1962.96