Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2078 ATGGACGAACCCACATTGTTGTTCCCCGACACCGACCTCGATCTCAGCTTCACCAGCACCACCACCGACCGCACCACCATCAGTGCAAGAGCCAGCTTAGCCCGAACCAGCAGCCTCACCCTCAGCTTCAACGACCGTCTCTCGACATTCTCCGCCGCGGAAAACACCACCGCCGCCGTCACCAACCGCCTTCCCCACCGGAGCGCCGACCCTAACTGGTCCGCCATCCAGGCCGCCGTCAATCTCTCCTCCGACGGGCGCCTCCACCTCCGCCACCTCAAGCTCCTTCGCCACCTCGGCTCCGGCAACCTCGGCCGCGTCTTCCTCTGCCGCCTACGCGACTACGACGGCGCCCACTTCGCCCTCAAGGTCGTTGATAAAGACCTCCTCACAGCGAAGAAACTCTCCCACGCGCAGACCGAGGCGGAGATTCTCCAAACGCTCGACCACCCCTTCCTCCCCACGCTCTACGCGCGCATCGACGTGTCTCACTACACGTGCCTCCTCATCGATTTCTGCCCCGGCGGCGACCTCCACTCCCTCCTCCGCAGGCAGCCCCAATTCCGCCTCCCCCTCGCGGCGGCGCGTTTCTTCGCCGCCGAGGTCCTCGTCGCCCTCGAGTATCTCCACGCGCTCGGCATCGTCTACCGCGACCTTAAACCAGAGAACGTCCTCATGCGTGAAGATGGCCATGTCATGCTCTCAGATTTCGATTTGTGCTTCAAATCTGACGTGGCACCCTGTGTCGACTTTCGGGCCCACTCCCCACGCCGAGTGGGCCCCACGAACGGTTGTTTCAGTTATAACTGTCATCGATCTCAAGACAGGAGAAAAGAAAAATTGGTTGCAGAGTTCGTGGCGGAACCGGTGACGGCGTTTTCACGGTCGAGCGTTGGGACGCACGAGTATTTAGCTCCCGAGCTTGTTTCTGGTAACGGTCACGGTAACGGCGTGGATTGGTGGGCTTTTGGGGTTTTCGTTTACGAGTTGTTGTACGGGACGACGCCGTTTAAAGGGTGTAGCAAGGAGGGCACGCTGCGCAAGATAGCGTCGAGCAAGGATGTGAGGTTTGTCCACGTGGCGGAGCGAGAGGAGCCTGGGATGACTGAGGCGAGGGATTTGATTGAGAAGTTGTTGGTGAAGGACCCTAAGAAGAGGCTAGGATGCGCCAAGGGTGCTACTGAGATTAAACGACACCGTTTTTTTGATGGAATTAAGTGGCCTTTGATTAGGACTTATCGGCCACCGGAGCTGAAGGGTTTGATGAGAAGGAATAAGTCAAAAGTGAGTTGCAAGAGTAAGAGGTGGTGGTGGTGGTGGAAGAGACTAGGGCATGTTGTGAGGACCAAAGGGGGTAAATATAATTTCTTTTCAAACTATAGTAATAATAATAATAATTATTATCATTTTGTTGATGATAATTACAAGGTTAGGTAG 1437 0.5616 MDEPTLLFPDTDLDLSFTSTTTDRTTISARASLARTSSLTLSFNDRLSTFSAAENTTAAVTNRLPHRSADPNWSAIQAAVNLSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGAHFALKVVDKDLLTAKKLSHAQTEAEILQTLDHPFLPTLYARIDVSHYTCLLIDFCPGGDLHSLLRRQPQFRLPLAAARFFAAEVLVALEYLHALGIVYRDLKPENVLMREDGHVMLSDFDLCFKSDVAPCVDFRAHSPRRVGPTNGCFSYNCHRSQDRRKEKLVAEFVAEPVTAFSRSSVGTHEYLAPELVSGNGHGNGVDWWAFGVFVYELLYGTTPFKGCSKEGTLRKIASSKDVRFVHVAEREEPGMTEARDLIEKLLVKDPKKRLGCAKGATEIKRHRFFDGIKWPLIRTYRPPELKGLMRRNKSKVSCKSKRWWWWWKRLGHVVRTKGGKYNFFSNYSNNNNNYYHFVDDNYKVR* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2078 478 PANTHER FLIPPASE KINASE 1-RELATED 8 433 - -
Gso15g2078 478 Gene3D Transferase(Phosphotransferase) domain 1 295 415 - -
Gso15g2078 478 SMART serkin_6 93 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2078 478 Gene3D Phosphorylase Kinase; domain 1 92 176 - -
Gso15g2078 478 Pfam Protein kinase domain 95 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2078 478 Pfam Protein kinase domain 294 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2078 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Gso15g2078 478 PANTHER TELOKIN/MYOSIN LIGHT CHAIN KINASE-RELATED 8 433 - -
Gso15g2078 478 Gene3D Transferase(Phosphotransferase) domain 1 177 242 - -
Gso15g2078 478 SUPERFAMILY Protein kinase-like (PK-like) 72 420 IPR011009 -
Gso15g2078 478 ProSiteProfiles Protein kinase domain profile. 93 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2078 Gso-Chr15 48238138 48239913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2078 8 471 AGC Kinase Gene Family AT1G53700 63.410 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso15g2078 Pkinase 3.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2078 - - gmx:100778383 872.078