Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2077 ATGATGGCATTGGAGTGTAGTAGTTTCCACTTCCTAAATGGGGTTTACATGGTGCTGTTTTTTTGCCTTGGCATTGTCCTTGTAAATTCGGTTAATGAAGAGGGTTTGAGTCTTTTGAGGTTCAAAGCTTCCCTTCTTGACCCAAACAACAATCTCTATAACTGGGATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGTATTGCACAGGTTCAGTGGTAACTTCTGTGAAACTTTACCAACTCAATCTGTCTGGTACTTTGGCTCCTGCCATCTGTAATCTTCCAAAGCTTCTTGAGTTGAATTTGTCAAAAAATTTCATCTCTGGCCCCATTCCTGATGGTTTTGTTGACTGTGGTGGTTTGGAGGTTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGAACCCAATTTGGAAAATCACAACACTTAGAAAGCTTTACCTGTGTGAAAATTACATGTATGGTGAAGTGCCAGCGGAGCTTGGGAATTTGGTATCTCTAGAGGAACTGGTCATATATAGCAATAATTTGACTGGAAGAATTCCATCATCAATAGGAAAGTTGAAACAGCTTAAAGTTATAAGGTCAGGTCTAAATGCTCTCTCAGGGCCAATACCTGCTGAAATCAGTGAGTGCCAGAGCTTGGAGATATTGGGGTTGGCACAGAATCAGCTAGAAGGTTCAATCCCAAGGGAGCTTGAAAAGCTTCAGAACCTTACCAATATACTTCTGTGGCAAAACTATTTCTCTGGGGAGATTCCTCCAGAGATTGGAAACATTAGTAGCTTGGAACTGCTTGCTTTGCACCAAAATTCACTGAGTGGTGGTGTCCCTAAGGAACTGGGAAAGCTGTCGCAGTTGAAGAGGTTGTACATGTACACCAACATGTTGAATGGAACAATTCCACCAGAGCTAGGGAACTGCACAAAAGCTATTGAGATAGACCTTTCTGAGAACCATTTGATTGGGACCATTCCAAAGGAGTTGGGAATGATCTCTAATCTTAGCTTGCTTCATCTGTTTGAAAACAATCTGCAGGGTCATATTCCAAGGGAACTCGGTCAGTTGAGGGTGCTAAGAAATTTAGATCTGTCACTGAATAACTTGACAGGTACAATTCCACTGGAGTTTCAAAACCTTACATACATGGAGGATTTGCAGCTATTTGACAACCAACTTGAAGGTGTGATTCCTCCTCATCTTGGAGCTATTAGAAACCTAACTATTCTTGATATATCTGCAAACAATCTTGTTGGTATGATACCTATCAATCTTTGTGGATATCAGAAGCTGCAATTCCTGAGCCTTGGTTCAAATAGGTTGTTTGGAAACATTCCTTACAGCCTCAAAACATGCAAATCTCTTGTGCAGCTTATGCTGGGGGACAACCTTTTGACAGGAAGCCTACCTGTTGAATTGTATGAGCTTCACAATCTCACTGCACTTGAACTCTATCAGAACCAATTTTCGGGGATAATAAACCCGGGGATAGGCCAACTCAGGAATCTAGAGAGGCTTGGCTTGTCGGCTAACTACTTTGAAGGCTATCTCCCTCCTGAGATTGGAAATTTGACACAACTTGTGACATTCAATGTTTCCTCTAACCGTTTCAGTGGAAGTATAGCTCATGAGTTGGGAAACTGTGTAAGATTGCAGAGGCTTGATCTTAGCAGGAATCACTTCACTGGAATGCTTCCAAATCAAATTGGCAACTTGGTGAACTTGGAGCTGTTGAAAGTTTCTGATAACATGCTCTCAGGAGAAATACCAGGCACTTTGGGGAATCTTATTAGGCTCACAGACCTGGAACTAGGTGGCAACCAGTTTTCAGGAAGCATCTCCCTTCACTTGGGAAAACTTGGAGCTCTTCAGATTGCACTTAACCTGAGCCACAACAAACTTTCTGGCTTAATTCCTGATAGCCTTGGGAACTTGCAAATGCTAGAGTCCCTTTATCTAAATGACAATGAACTTGTTGGTGAGATTCCTTCATCAATTGGTAACCTTCTCAGTCTTGTAATATGCAATGTATCAAACAACAAGCTGGTAGGAACTGTTCCAGACACCACTACATTTAGAAAGATGGATTTCACAAACTTTGCTGGGAACAACGGCTTGTGCCGTGTTGGTACCAATCACTGCCATCCATCTCTATCTCCCTCTCATGCTGCAAAACATAGCTGGATCAGAAATGGTTCATCAAGGGAAAAGATAGTGAGTATTGTTTCTGGGGTGGTTGGACTAGTTTCTCTTATTTTCATAGTGTGTATATGTTTTGCCATGAGGCGTGGTAGCCGTGCTGCTTTTGTTTCACTTGAAAGGCAAATAGAGACTCATGTCTTGGATAACTACTACTTTCCTAAAGAAGGCTTTACATACCAGGATCTCTTGGAAGCCACAGGAAATTTTTCGGAAGCTGCAGTTCTAGGAAGAGGAGCTTGTGGAACTGTTTACAAGGCTGCTATGAGTGATGGTGAAGTGATTGCTGTTAAGAAGCTGAATTCGCGTGGAGAAGGAGCAAATAATGTTGACAGAAGCTTCCTTGCTGAGATTTCAACTCTTGGAAAGATCAGGCACAGGAACATTGTGAAGCTGTATGGATTTTGCTACCATGAGGATTCTAATCTTCTCTTGTATGAATACATGGAAAATGGAAGCCTTGGAGAACAACTTCATTCAAGTGTAACCACTTGTGCATTGGATTGGGGTAGTAGATATAAAGTTGCTCTTGGAGCAGCAGAAGGCTTATGCTATCTTCATTATGATTGTAAGCCTCAGATCATCCATCGAGATATAAAGTCAAACAACATATTACTTGATGAGATGTTTCAGGCTCATGTTGGAGACTTTGGCTTGGCAAAGTTGATTGACTTTTCCTACTCAAAATCTATGTCTGCTGTGGCTGGCTCATATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTGGAGCTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGTGATTTAGTGACTTGTGTGAGAAGAGCAATTCAGGCATCAGAATCTCCATTGGATGAGGATGATGGCATTTCTTCCAAAGATGGTGGTCTTGAGTTGTAA 3153 0.4199 MMALECSSFHFLNGVYMVLFFCLGIVLVNSVNEEGLSLLRFKASLLDPNNNLYNWDSSDLTPCNWTGVYCTGSVVTSVKLYQLNLSGTLAPAICNLPKLLELNLSKNFISGPIPDGFVDCGGLEVLDLCTNRLHGPLLNPIWKITTLRKLYLCENYMYGEVPAELGNLVSLEELVIYSNNLTGRIPSSIGKLKQLKVIRSGLNALSGPIPAEISECQSLEILGLAQNQLEGSIPRELEKLQNLTNILLWQNYFSGEIPPEIGNISSLELLALHQNSLSGGVPKELGKLSQLKRLYMYTNMLNGTIPPELGNCTKAIEIDLSENHLIGTIPKELGMISNLSLLHLFENNLQGHIPRELGQLRVLRNLDLSLNNLTGTIPLEFQNLTYMEDLQLFDNQLEGVIPPHLGAIRNLTILDISANNLVGMIPINLCGYQKLQFLSLGSNRLFGNIPYSLKTCKSLVQLMLGDNLLTGSLPVELYELHNLTALELYQNQFSGIINPGIGQLRNLERLGLSANYFEGYLPPEIGNLTQLVTFNVSSNRFSGSIAHELGNCVRLQRLDLSRNHFTGMLPNQIGNLVNLELLKVSDNMLSGEIPGTLGNLIRLTDLELGGNQFSGSISLHLGKLGALQIALNLSHNKLSGLIPDSLGNLQMLESLYLNDNELVGEIPSSIGNLLSLVICNVSNNKLVGTVPDTTTFRKMDFTNFAGNNGLCRVGTNHCHPSLSPSHAAKHSWIRNGSSREKIVSIVSGVVGLVSLIFIVCICFAMRRGSRAAFVSLERQIETHVLDNYYFPKEGFTYQDLLEATGNFSEAAVLGRGACGTVYKAAMSDGEVIAVKKLNSRGEGANNVDRSFLAEISTLGKIRHRNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSVTTCALDWGSRYKVALGAAEGLCYLHYDCKPQIIHRDIKSNNILLDEMFQAHVGDFGLAKLIDFSYSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTCVRRAIQASESPLDEDDGISSKDGGLEL* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2077 1050 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 1031 - -
Gso15g2077 1050 ProSiteProfiles Protein kinase domain profile. 807 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2077 1050 SMART LRR_typ_2 360 383 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 288 312 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 168 192 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 552 575 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 624 648 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 504 528 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 96 120 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 576 600 IPR003591 -
Gso15g2077 1050 SMART LRR_typ_2 649 673 IPR003591 -
Gso15g2077 1050 Pfam Leucine Rich Repeat 631 649 IPR001611 GO:0005515
Gso15g2077 1050 Gene3D Phosphorylase Kinase; domain 1 770 885 - -
Gso15g2077 1050 Gene3D Ribonuclease Inhibitor 239 314 IPR032675 -
Gso15g2077 1050 Gene3D Ribonuclease Inhibitor 36 142 IPR032675 -
Gso15g2077 1050 Pfam Protein kinase domain 809 1013 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2077 1050 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
Gso15g2077 1050 Gene3D Ribonuclease Inhibitor 433 722 IPR032675 -
Gso15g2077 1050 SUPERFAMILY L domain-like 34 313 - -
Gso15g2077 1050 Gene3D Transferase(Phosphotransferase) domain 1 886 1042 - -
Gso15g2077 1050 SUPERFAMILY Protein kinase-like (PK-like) 784 1015 IPR011009 -
Gso15g2077 1050 SUPERFAMILY RNI-like 371 688 - -
Gso15g2077 1050 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Gso15g2077 1050 SMART serkin_6 807 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2077 1050 Pfam Leucine rich repeat 554 613 IPR001611 GO:0005515
Gso15g2077 1050 Gene3D Ribonuclease Inhibitor 315 432 IPR032675 -
Gso15g2077 1050 Gene3D Ribonuclease Inhibitor 143 237 IPR032675 -
Gso15g2077 1050 PANTHER OS07G0152200 PROTEIN 18 1031 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2077 Gso-Chr15 48212329 48218026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2077 53 1037 Receptor kinase-like Gene Family AT1G73080 38.189 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso15g2077 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2077 - - gmx:100778032 2086.23