Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2067 ATGGCTTCTTTCCAAGGCATCAACAACAACATTGAAACCCTAATTCCACCAGAGCTCCTCATAACTCAGATCATGCAACTCCATGCAAGCATCTCCAAGCTTGAAACCCTAAGGCCATGCAAGCAAGTCAATAGCCTCTTCACTCACCTAGTGAAGCTTTGCACCCTCCCTTCCTCCATTGACATTGAATCCTTGCCCCAAGAGGTGCAAGACATGCGTGAGAGCCTCATTAACCTAAGTGGCCGCGCCGAGGGGCTCCTAGAGCTCGAATTCTCGACCTTCATAAGCCTCACACCCGAGCCAATGAAAAACGTAACCCTATTCCCTTACTACGGGAACTATGTCAAGCTAGCAAACATGGAGAGCAAAATCCTCACAGAAAACGGAGTGGTAAACCCTAAGAAAGTGGCCTTTGTAGGGTCAGGGCCAATGCCACTCACCTCCATCGTAATGGCCACACACCACATGGAATCCACCCACTTTGACAACTTTGACATCGACGAAAAGGCAAACGAGGTGGCTCGAAAGATCGTGGCTTCGGACGTGGCACTTGAGAAGAGGATGAAGTTTGAGACACAAGATGTCATGGAAGTGAGGGAGAGGTTAGGGCAATATGATTGCATCTTTTTGGCAGCGCTTGTGGGAATGAGTAGGGAAGCAAAAGTGAAGATTTTGGGACACATAAGGAAGTATATGAAGGAAGGAGGGGTCTTGCTTGTGAGAAGTGCAAAAGGGGCAAGGGCTTTTTTGTACCCTATAGTTGAGGAACGTGACATGGTGAATTTTGAGGTTCTCACCATCTTTCACCCCACAAATGATGTTATCAACTCAGTTGTTCTTCTTCGCAAGCCTAAGGCTTAA 861 0.475 MASFQGINNNIETLIPPELLITQIMQLHASISKLETLRPCKQVNSLFTHLVKLCTLPSSIDIESLPQEVQDMRESLINLSGRAEGLLELEFSTFISLTPEPMKNVTLFPYYGNYVKLANMESKILTENGVVNPKKVAFVGSGPMPLTSIVMATHHMESTHFDNFDIDEKANEVARKIVASDVALEKRMKFETQDVMEVRERLGQYDCIFLAALVGMSREAKVKILGHIRKYMKEGGVLLVRSAKGARAFLYPIVEERDMVNFEVLTIFHPTNDVINSVVLLRKPKA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2067 286 Gene3D Vaccinia Virus protein VP39 19 285 IPR029063 -
Gso15g2067 286 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 12 286 IPR004298 GO:0030410|GO:0030418
Gso15g2067 286 PANTHER NICOTIANAMINE SYNTHASE 1 285 - -
Gso15g2067 286 Pfam Nicotianamine synthase protein 18 285 IPR004298 GO:0030410|GO:0030418
Gso15g2067 286 CDD AdoMet_MTases 164 240 - -
Gso15g2067 286 PANTHER NICOTIANAMINE SYNTHASE 3 1 285 IPR004298 GO:0030410|GO:0030418
Gso15g2067 286 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 242 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2067 Gso-Chr15 48078807 48080017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2067 19 283 Nicotianamine Synthase Gene Family AT5G04950 51.111 1.70e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2067 K05953 - gmx:100819726 559.681