LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g2058	ATGGCTTCCCCTTTGCTTCCATTTCTCTTCCTCTCAATGGTTCTGTTACCCTTTCAACACATCAATGTTATGGCCCAAACCAAAAGCAACATAGCCATTGGTGACTCTCACACAGCAGGAGCCAGCACCTCCCCATGGTTGGTTTCATCACCTTCTGGTGACTTTGCCTTTGGGTTCCTCCCACTTGAGGACACTCCTGATCACTTCATGCTTTGCATTTGGTATGCAAAGATTCAAGACAAAACCATAGTTTGGTTTGCCAACAGAGACAAGCCTGCACCAAAGGGCTCAAAAGTAGTGCTCACTGCTGATGATGGGTTGGTGCTCATCACTGCCCCAAATGGTAACCAGTTATGGAAGACTGGGGGACTCACTGTGAGAGTTTCTAGTGGTGTGTTAAATAACACTGGCAACTTTGTGCTTCAGGATGGTGACTCCAACACTGTTTGGGAGAGTTTCAAGGACTATAGAGACACCTTGCTGCCTTATCAAACTATGGAAAGGGGTCAAAAGCTTTCTTCTAAACTTAGGAGGAATTACTTCAACAAGGGAAGGTTTGTGCTCTTTTTCCAAAATGATGGTAACCTTGTAATGCACTCTATAAACTTGCCATCTGGGTATGCTAATGAACACTACTATGAAAGTGGAACCGTTGAGTCCAACATATCAAGTGCTGGGACTCAATTGGTGTTTGATGGGTCAGGAGACATGTATGTTTTGAGAGAGAACAATGAGAAATACAACTTGTCAAGAGGGGGTAGTGGAGCTTCTTCTACCACTCAATTTTTTTACCTTAGAGCAACTCTTGATTTTGATGGGGTGTTCACACTCTATCGACATCCTAAGGGTTCTTCTGGTACTGGAGGTTGGACCCCAGTGTGGTCTCATCCAGATAATATCTGTAAGGATTATGTTGCTAGTGCAGGTAGTGGTGTTTGTGGATATAATAGCATTTGTAGTTTGAGAGATGATAAGAGGCCAAATTGTAAGTGCCCAAAATGGTACTCACTGGTCGACCCTAATGATCCCAATGGTAGCTGCAAACCAGATTTTGTACAGGCATGTGCTGTAGATGAACTTAGTAACAGAAAGGATCTCTATGACTTTGAGGTGTTGATAGATACTGATTGGCCTCAATCAGATTATGTGCTTCAAAGACCCTTCAATGAAGAACAATGCAGGCAATCTTGTATGGAAGATTGCATGTGTTCTGTTGCCATTTTCAGGCTAGGTGATAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGTAGAGTTGATGCCACACTTAATGGTGCAAAGGCCTTCATGAAAGTGAGGAAAGACAACTCCTCCTTGATTGTTCCTACAATCATTGTGAACAAGAATAGGAACACTTCGATTTTGGTTGGATCAGTGCTTTTGGGTAGTTCTGCTTTTCTCAATCTCATTTTGCTTGGAGCAATATGCTTGAGCACTTCCTATGTTTTTCGGTACAAGAAGAAGCTTAGAAGTATTGGCAGAAGTGACACTATTGTGGAAACCAACTTGCGTTGCTTCACTTATAAGGAACTTGAAAAAGCCACCGATGGCTTTGACAAAGTGCTAGGAAAGGGAGCTTTTGGTATTGTGTATGAAGGAGTCATCAACATGGGTTCCGATACTCGTGTTGCGGTGAAAAGGTTGAACACTTTTCTCTTGGAAGATGTTCATAAGGAATTCAAGAATGAACTGAATGCCATTGGCCTCACGCATCATAAAAACTTGGTCCGTATACTTGGATTTTGTGACACTGAAGAAAAAAGGTTGCTGGTTTATGAGTATATGAGTAATGGCACTTTAGCAAGTCTTCTTTTCAATATTCTGGAGAAACCAAGTTGGGAACTGAGGCTACAAATTGCAATTGGGGTTGCTAGAGGACTTCTATATTTGCATGAAGAGTGCAGCACACAGATCATCCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGATTACTATAATGCAAGGATTTCTGACTTCGGATTGGCCAAGCTTTTGAACATGAACCAAAGCAGAACAAACACTGCCATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAAAACATGCCGATCACAGCTAAAGTAGATGTCTATAGTTATGGGGTGTTGTTGCTTGAGATAGTTTCATGCAGAAAAAGTGTAGAGTTCGAGACAGAAGATAAAGAGAAAGCAATCCTAGCTGAATGGGCTTATGACTGCTACACTGAAAGAACTCTTCATGCCTTGGTTGAGGGTGACAAAGAGGCATTGGATGACATGAAGAACTTGGAGAAATTGGTAATGATTGCCCTTTGGTGTGTGCAAGAGGATCCTGATCTTAGACCAACTATGAGAAATGTGACACAAATGCTTGAAGGTGTTGTTGAAGTGAAAGTACCACCATGCCCCTCACAAATTAGTGATCAATATTCCTAA	2448	0.4195	MASPLLPFLFLSMVLLPFQHINVMAQTKSNIAIGDSHTAGASTSPWLVSSPSGDFAFGFLPLEDTPDHFMLCIWYAKIQDKTIVWFANRDKPAPKGSKVVLTADDGLVLITAPNGNQLWKTGGLTVRVSSGVLNNTGNFVLQDGDSNTVWESFKDYRDTLLPYQTMERGQKLSSKLRRNYFNKGRFVLFFQNDGNLVMHSINLPSGYANEHYYESGTVESNISSAGTQLVFDGSGDMYVLRENNEKYNLSRGGSGASSTTQFFYLRATLDFDGVFTLYRHPKGSSGTGGWTPVWSHPDNICKDYVASAGSGVCGYNSICSLRDDKRPNCKCPKWYSLVDPNDPNGSCKPDFVQACAVDELSNRKDLYDFEVLIDTDWPQSDYVLQRPFNEEQCRQSCMEDCMCSVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFMKVRKDNSSLIVPTIIVNKNRNTSILVGSVLLGSSAFLNLILLGAICLSTSYVFRYKKKLRSIGRSDTIVETNLRCFTYKELEKATDGFDKVLGKGAFGIVYEGVINMGSDTRVAVKRLNTFLLEDVHKEFKNELNAIGLTHHKNLVRILGFCDTEEKRLLVYEYMSNGTLASLLFNILEKPSWELRLQIAIGVARGLLYLHEECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIVSCRKSVEFETEDKEKAILAEWAYDCYTERTLHALVEGDKEALDDMKNLEKLVMIALWCVQEDPDLRPTMRNVTQMLEGVVEVKVPPCPSQISDQYS*	816

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g2058	815	SUPERFAMILY	alpha-D-mannose-specific plant lectins	69	217	IPR036426	-
	Gso15g2058	815	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1	14	811	-	-
	Gso15g2058	815	CDD	B_lectin	47	153	IPR001480	-
	Gso15g2058	815	Gene3D	-	25	155	IPR036426	-
	Gso15g2058	815	ProSitePatterns	Protein kinases ATP-binding region signature.	529	553	IPR017441	GO:0005524
	Gso15g2058	815	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	645	657	IPR008271	GO:0004672\|GO:0006468
	Gso15g2058	815	PIRSF	SRK	1	815	IPR024171	GO:0004674
	Gso15g2058	815	Pfam	Protein tyrosine and serine/threonine kinase	525	795	IPR001245	GO:0004672\|GO:0006468
	Gso15g2058	815	ProSiteProfiles	Protein kinase domain profile.	523	799	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso15g2058	815	Pfam	D-mannose binding lectin	82	170	IPR001480	-
	Gso15g2058	815	CDD	STKc_IRAK	529	797	-	-
	Gso15g2058	815	ProSiteProfiles	Bulb-type lectin domain profile.	38	154	IPR001480	-
	Gso15g2058	815	SMART	blect_4	36	157	IPR001480	-
	Gso15g2058	815	Gene3D	-	156	306	-	-
	Gso15g2058	815	SMART	serkin_6	523	795	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso15g2058	815	Gene3D	Phosphorylase Kinase; domain 1	498	601	-	-
	Gso15g2058	815	Gene3D	Transferase(Phosphotransferase) domain 1	602	804	-	-
	Gso15g2058	815	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	14	811	-	-
	Gso15g2058	815	SUPERFAMILY	Protein kinase-like (PK-like)	505	796	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g2058	Gso-Chr15	47956907	47959653	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g2058	509	797	Receptor kinase-like Gene Family	AT1G60800	42.517	1.00e-71	244

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Gso15g2058		PK_Tyr_Ser-Thr	2.1e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g2058	-		-	gmx:100815462	1642.48