Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2058 ATGGCTTCCCCTTTGCTTCCATTTCTCTTCCTCTCAATGGTTCTGTTACCCTTTCAACACATCAATGTTATGGCCCAAACCAAAAGCAACATAGCCATTGGTGACTCTCACACAGCAGGAGCCAGCACCTCCCCATGGTTGGTTTCATCACCTTCTGGTGACTTTGCCTTTGGGTTCCTCCCACTTGAGGACACTCCTGATCACTTCATGCTTTGCATTTGGTATGCAAAGATTCAAGACAAAACCATAGTTTGGTTTGCCAACAGAGACAAGCCTGCACCAAAGGGCTCAAAAGTAGTGCTCACTGCTGATGATGGGTTGGTGCTCATCACTGCCCCAAATGGTAACCAGTTATGGAAGACTGGGGGACTCACTGTGAGAGTTTCTAGTGGTGTGTTAAATAACACTGGCAACTTTGTGCTTCAGGATGGTGACTCCAACACTGTTTGGGAGAGTTTCAAGGACTATAGAGACACCTTGCTGCCTTATCAAACTATGGAAAGGGGTCAAAAGCTTTCTTCTAAACTTAGGAGGAATTACTTCAACAAGGGAAGGTTTGTGCTCTTTTTCCAAAATGATGGTAACCTTGTAATGCACTCTATAAACTTGCCATCTGGGTATGCTAATGAACACTACTATGAAAGTGGAACCGTTGAGTCCAACATATCAAGTGCTGGGACTCAATTGGTGTTTGATGGGTCAGGAGACATGTATGTTTTGAGAGAGAACAATGAGAAATACAACTTGTCAAGAGGGGGTAGTGGAGCTTCTTCTACCACTCAATTTTTTTACCTTAGAGCAACTCTTGATTTTGATGGGGTGTTCACACTCTATCGACATCCTAAGGGTTCTTCTGGTACTGGAGGTTGGACCCCAGTGTGGTCTCATCCAGATAATATCTGTAAGGATTATGTTGCTAGTGCAGGTAGTGGTGTTTGTGGATATAATAGCATTTGTAGTTTGAGAGATGATAAGAGGCCAAATTGTAAGTGCCCAAAATGGTACTCACTGGTCGACCCTAATGATCCCAATGGTAGCTGCAAACCAGATTTTGTACAGGCATGTGCTGTAGATGAACTTAGTAACAGAAAGGATCTCTATGACTTTGAGGTGTTGATAGATACTGATTGGCCTCAATCAGATTATGTGCTTCAAAGACCCTTCAATGAAGAACAATGCAGGCAATCTTGTATGGAAGATTGCATGTGTTCTGTTGCCATTTTCAGGCTAGGTGATAGCTGCTGGAAGAAGAAGTTGCCACTTTCAAATGGTAGAGTTGATGCCACACTTAATGGTGCAAAGGCCTTCATGAAAGTGAGGAAAGACAACTCCTCCTTGATTGTTCCTACAATCATTGTGAACAAGAATAGGAACACTTCGATTTTGGTTGGATCAGTGCTTTTGGGTAGTTCTGCTTTTCTCAATCTCATTTTGCTTGGAGCAATATGCTTGAGCACTTCCTATGTTTTTCGGTACAAGAAGAAGCTTAGAAGTATTGGCAGAAGTGACACTATTGTGGAAACCAACTTGCGTTGCTTCACTTATAAGGAACTTGAAAAAGCCACCGATGGCTTTGACAAAGTGCTAGGAAAGGGAGCTTTTGGTATTGTGTATGAAGGAGTCATCAACATGGGTTCCGATACTCGTGTTGCGGTGAAAAGGTTGAACACTTTTCTCTTGGAAGATGTTCATAAGGAATTCAAGAATGAACTGAATGCCATTGGCCTCACGCATCATAAAAACTTGGTCCGTATACTTGGATTTTGTGACACTGAAGAAAAAAGGTTGCTGGTTTATGAGTATATGAGTAATGGCACTTTAGCAAGTCTTCTTTTCAATATTCTGGAGAAACCAAGTTGGGAACTGAGGCTACAAATTGCAATTGGGGTTGCTAGAGGACTTCTATATTTGCATGAAGAGTGCAGCACACAGATCATCCATTGTGACATAAAGCCTCAAAACATACTCCTTGATGATTACTATAATGCAAGGATTTCTGACTTCGGATTGGCCAAGCTTTTGAACATGAACCAAAGCAGAACAAACACTGCCATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAAAACATGCCGATCACAGCTAAAGTAGATGTCTATAGTTATGGGGTGTTGTTGCTTGAGATAGTTTCATGCAGAAAAAGTGTAGAGTTCGAGACAGAAGATAAAGAGAAAGCAATCCTAGCTGAATGGGCTTATGACTGCTACACTGAAAGAACTCTTCATGCCTTGGTTGAGGGTGACAAAGAGGCATTGGATGACATGAAGAACTTGGAGAAATTGGTAATGATTGCCCTTTGGTGTGTGCAAGAGGATCCTGATCTTAGACCAACTATGAGAAATGTGACACAAATGCTTGAAGGTGTTGTTGAAGTGAAAGTACCACCATGCCCCTCACAAATTAGTGATCAATATTCCTAA 2448 0.4195 MASPLLPFLFLSMVLLPFQHINVMAQTKSNIAIGDSHTAGASTSPWLVSSPSGDFAFGFLPLEDTPDHFMLCIWYAKIQDKTIVWFANRDKPAPKGSKVVLTADDGLVLITAPNGNQLWKTGGLTVRVSSGVLNNTGNFVLQDGDSNTVWESFKDYRDTLLPYQTMERGQKLSSKLRRNYFNKGRFVLFFQNDGNLVMHSINLPSGYANEHYYESGTVESNISSAGTQLVFDGSGDMYVLRENNEKYNLSRGGSGASSTTQFFYLRATLDFDGVFTLYRHPKGSSGTGGWTPVWSHPDNICKDYVASAGSGVCGYNSICSLRDDKRPNCKCPKWYSLVDPNDPNGSCKPDFVQACAVDELSNRKDLYDFEVLIDTDWPQSDYVLQRPFNEEQCRQSCMEDCMCSVAIFRLGDSCWKKKLPLSNGRVDATLNGAKAFMKVRKDNSSLIVPTIIVNKNRNTSILVGSVLLGSSAFLNLILLGAICLSTSYVFRYKKKLRSIGRSDTIVETNLRCFTYKELEKATDGFDKVLGKGAFGIVYEGVINMGSDTRVAVKRLNTFLLEDVHKEFKNELNAIGLTHHKNLVRILGFCDTEEKRLLVYEYMSNGTLASLLFNILEKPSWELRLQIAIGVARGLLYLHEECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLEIVSCRKSVEFETEDKEKAILAEWAYDCYTERTLHALVEGDKEALDDMKNLEKLVMIALWCVQEDPDLRPTMRNVTQMLEGVVEVKVPPCPSQISDQYS* 816
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2058 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 217 IPR036426 -
Gso15g2058 815 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RLK1 14 811 - -
Gso15g2058 815 CDD B_lectin 47 153 IPR001480 -
Gso15g2058 815 Gene3D - 25 155 IPR036426 -
Gso15g2058 815 ProSitePatterns Protein kinases ATP-binding region signature. 529 553 IPR017441 GO:0005524
Gso15g2058 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Gso15g2058 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Gso15g2058 815 Pfam Protein tyrosine and serine/threonine kinase 525 795 IPR001245 GO:0004672|GO:0006468
Gso15g2058 815 ProSiteProfiles Protein kinase domain profile. 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2058 815 Pfam D-mannose binding lectin 82 170 IPR001480 -
Gso15g2058 815 CDD STKc_IRAK 529 797 - -
Gso15g2058 815 ProSiteProfiles Bulb-type lectin domain profile. 38 154 IPR001480 -
Gso15g2058 815 SMART blect_4 36 157 IPR001480 -
Gso15g2058 815 Gene3D - 156 306 - -
Gso15g2058 815 SMART serkin_6 523 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2058 815 Gene3D Phosphorylase Kinase; domain 1 498 601 - -
Gso15g2058 815 Gene3D Transferase(Phosphotransferase) domain 1 602 804 - -
Gso15g2058 815 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 811 - -
Gso15g2058 815 SUPERFAMILY Protein kinase-like (PK-like) 505 796 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso15g2058 Gso-Chr15 47956907 47959653 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2058 509 797 Receptor kinase-like Gene Family AT1G60800 42.517 1.00e-71 244
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso15g2058 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2058 - - gmx:100815462 1642.48