Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2038 ATGGATGCGATAGCTCATGTACCGGGTGTTTCTGAAATTGCTAATTATGTGATTACATTTATTAAGGGTCAAATTGGGTACATATCCTCCTACGATGAAAACCTTGAAAAGCTTATAACCGAGGCTCAAACTCTGAAGGATACTCAAGACGGTGTGCAACACCGGGTTGTTGAGGCTGAAAGGCATGGAGACAAGATTGAAAATATTGTACAGAACTGGCTGAAGAAAGCAAATGAAATGGTTGCTGCGGCAAATAAAGTTATTGATGTTGAAGGAACTAGATGGTGTCTGGGACATTATTGTCCCTATCTGTGGACAAGATGTCAGCTGAGCAAGAGTTTTGAAAAAATTACAAAAGAGATTTCAGATGTCATAGAGAAAGGAAAATTTGATACAATTTCTTACCGTGATGCCCCTGATCTCACAATTACACCATTTTCTAGAGGTTATGAAGCACTGGAGTCCAGAACATCAATGCTGAGTGAGATTAAGGAAATTCTTAAGGATCCTAAAATGTACATGATTGGGGTGCATGGGATGGGTGGCGTGGGTAAAACAACTCTTGTGAATGAGTTAGCTTGGCAAGTGAAGAATGATGGCTCGTTTGGTGCTGTGGCTATTGCGACCATAACCAGTTCTCCAAATGTGGAAAATGTCCAAGACCAAATTGTTGTAGCTATATGTGGTAAAAATCTTGAACACACGACAAAAGTAGGAAGAATGGGAGAATTGCGTCGAAGGATAAAAGCACAGAACAATGTTCTCATTATTCTTGATGACATTTGGAGTGAACTTGATTTGACAGAAGTGGGAATTCCTTTTGGTGATGAACACAATGGTTGCAAATTGGTAATAACTTCCAGAGAACGTGAAGTGCTGATAAAGATGGACACTCAAAAAGATTTTAATCTTACAGCTTTACTGGAGGAAGATAGTTGGAATTTGTTCCAGAAAATAGCAGGTAATGTTGTTAATGAAGTTAGTATAAAACCAATTGCAGAAGAAGTGGCAAAATGTTGTGCTGGTTTGCCTCTTTTGATCACAGCCGTGGCAAAGGGTTTGAGAAAAAAGGAAGTCCATGCTTGGAGGGTTGCCCTAAAACAACTAAAGGAATTTAAGCATAAAGAGTTGGAGAATAATGTCTACCCTGCTTTGAAGTTAAGTTATGATTTTTTAGATACAGAGGAATTGAAGTCACTATTCTTATTCATTGGTTCATTTGGACTAAATCATATCCTCACTGAAGATTTGTTTAGATGTTGTTGGGGGTTGGGCTTTTATGGTGGCGTGGACAAATTGATGGAGGCAAGAGACACACATTACACATTAATAAATGAGCTTAGGGCCTCTTCATTATTGCTTGAAGGTGAACTTGATTGGGTTGGAATGCATGATGTTGTACGTGACGTGGCTAAATCAATTGCATCTAAGTCTCCTCCGATCGATCCGACCTATCCCACCTATGCAGATCAGTTTGGCAAGTGTCATTATATTAGATTTCAGTCTTCTTTGACTGAAGTCCAAGCTGATAACTTATTCTCTGGGATGATGAAAGAAGTGATGACTTTGAGTTTATATGAAATGTCCTTCACCCCTTTCCTACCCCCTTCTCTCAATCTCTTGATTAAGCTTCGCTCATTGAATCTAAGAAGATGTAAATTGGGAGACATAAGGATGGTGGCAAAACTCTCAAATTTAGAAATTCTTTCCTTGGAGAAGTCTAGTATTGAAGAGCTCCCAGAAGAAATAACACATCTGACTCATCTTCGTTTGCTAAATTTAACAGACTGCTATGAACTAAGAGTCATTCCTACAAATCTTACATCAAATTTGACGTGCTTAGAAGAATTGTACATGGGGGGTTGCAATAGTATTGAATGGGAAGTTGAAGGAAGCAGAAGTGAAAGCAAGAACGCTAGTTTAAGTGAGTTACAGAATTTGCATAATTTGACAACTTTGGAGATATCAATCAAAGATACTTCGGTTTTGTCAAGGGGCTTCCAGTTCCCTGCAAAGCTCGAAACATACAACATATTGATTGGTAATATTTCAGAATGGGGTCGGTCTCAAAATTGGTATGGTGAAGCTCTAGGACCCTCAAGAACGCTTAAGCTCACGGGCTCTTCGTGGACGAGCATATCGTCGTTGACCACAGTTGAGGACTTGAGGCTTGCTGAATTAAAAGGGGTTAAGGATTTGCTGTATGATTTGGATGTGGAAGGTTTTCCTCAATTAAAGCATCTGCATATTCATGGTAGTGATGAATTGTTGCACATCATTAACTCAAGAAGGTTAAGGAATCCCCATTCATCCGCATTCCCCAATTTGAAGTCTTTGCTTCTTTACAATCTATATACAATGGAAGAAATATGTCATGGTCCAATTCCAACACTGTCTTTTGCAAAGCTTGAAGTTATTAAAGTTAGAAATTGTCATGGATTGGATAATTTACTTTTGTATTCCCTCGCAAGAAACCTTTCTCAACTTCATGAGATGGAAATTAATAATTGCAGATGTATGAAAGAGATCATTGCTATGGAAGAACATGAGGATGAGAAAGAGCTTCTTGAGATTGTTCTACCTGAATTGCGTTCTCTCGCATTAGTTGAATTAACTAGGCTTCAGAGTTTCTGTTTGCCTCTTACAGTCGATATGGGTGATCCATCCATTCAAGGAATTCCTCTAGCACTGTTTAATCAACAGGTGGTGACCCCTAAACTTGAAACATTGGAGTTGTATGACATGGATATTTGCAAGATATGGGATGATAAACTTCCACTTCATTCTTGCTTTCAAAACTTGACACATTTAATAGTTGGCAGATGTAATAGTTTAACAAGTTTATTCGCATCCTGGATGGGAAGAGGATTGGTCAAACTACAATATCTTACTATTTACTGTTGTCAAATGTTGAAAGCCATATTCGTCCAAGAGGATCAATTTCCAAACTCGGAGACAGTGGAAATCAGCATCATGAATGATTGGAAATCAATACGGCCTAATCAAGAGCCTCCAAATTCCTTCCATCACAATCTGAAGATTAACATTTATGACTGTGAAAGCATGGATTTTGTCTTTCCCGTATCCGCGGCTAAAGAGCTTCGGCAGCACCAATTTCTTGAAATAAGATCATGTGGCATAAAGAATATTTTTGAAAAAAGTGATATTACTTGTGATATGACCCATGTTTACCTTGAAAAAATAACTGTAGAGAAGTGTCCAGGCATGAAGACCATAATTCCATCCTTTGTGCTATTTCAGTGTTTAGATAAATTGATTGTGTCCAGTTGTCATACACTGGTCAATATTATAAGGCCATCAACAACCACAAGTTTACCAAACCTCCGCATTTTAAGGATAAGTGAATGTGATGAGCTAGAGGAAATTTATGGAAGCAATAATGAGAGTGATGATGCACCATTGGGCGAGATTGCTTTTAGGAAATTGGAGGAATTGACATTGAAATACTTACCGAGGCTCACAAGCTTTTGCCAGGGAAGTTACGATTTCAGGTTTCCATCACTACAAATTGTAAGTATTGAAGAATGTCCAGTGATGGACACTTTTTGTCAGGGAAACATAACCACACCAAGCCTCACAAAGGTGGAATATAGATTGAGTAGAGATAATTGGTGTAGGATTGAAGATCATTGGTATGGCGACCTTAATACTACTGTTAGAACAGTTTTCACTAAAAAGTATCTATATGATGACTGGGAGACGCTAGATATCAGAAACAACAATAATTTGAAGTCCATATGGCCTAATCAAGTGACTCCAGATTTCTTTCCAAACCTGACGAAAATTGTCATTTATCTCTGTGAAAGCCAGTATGTCTTTCCCATCTACGTGGCTAAAGTGCTTCGGCAGCTCCAAGTTCTTGAAATAGGCTTGTGTACCATAGAGAATATTGTGGAAGAAAGTGATAGTACTTGTGAAATGATGGTTGTTTATCTTGAAGTACGGAAGTGTCATGATATGATGACCATAGTCCCATCCTCTGTTCAGTTTCATTCTTTAGATGAATTGCATGTGTCCAGGTGTCATGGACTAGTAAATATTATAATGCCATCAACAATCGCAAACTTACCAAATCTCCGCATTTTAATGATAAGTGAATGTGATGAGCTAGAGGAAGTTTATGGAAGCAATAATGAGAGTGATGAACCACTGGGCGAGATTGCTTTTATGAAATTGGAGGAATTGACATTGAAATACTTACCGTGGCTCAAAAGCTTTTGCCAGGGAAGTTACAACTTCAAGTTTCCATCATTACAAAAGGTACATTTGAAAGACTGTCCCATGATGGAGACTTTCTGTCATGGAAACTTAACCACAACAAGCCACATTGAGGTGCGATGCCTATATGGATGGAGTAATGAAGAATCAGAAGATCATTGGGATGGTGACCTTAATACTACTATTAGAACAATTTTCACTAAAGAGAATACAAAATAA 4458 0.3829 MDAIAHVPGVSEIANYVITFIKGQIGYISSYDENLEKLITEAQTLKDTQDGVQHRVVEAERHGDKIENIVQNWLKKANEMVAAANKVIDVEGTRWCLGHYCPYLWTRCQLSKSFEKITKEISDVIEKGKFDTISYRDAPDLTITPFSRGYEALESRTSMLSEIKEILKDPKMYMIGVHGMGGVGKTTLVNELAWQVKNDGSFGAVAIATITSSPNVENVQDQIVVAICGKNLEHTTKVGRMGELRRRIKAQNNVLIILDDIWSELDLTEVGIPFGDEHNGCKLVITSREREVLIKMDTQKDFNLTALLEEDSWNLFQKIAGNVVNEVSIKPIAEEVAKCCAGLPLLITAVAKGLRKKEVHAWRVALKQLKEFKHKELENNVYPALKLSYDFLDTEELKSLFLFIGSFGLNHILTEDLFRCCWGLGFYGGVDKLMEARDTHYTLINELRASSLLLEGELDWVGMHDVVRDVAKSIASKSPPIDPTYPTYADQFGKCHYIRFQSSLTEVQADNLFSGMMKEVMTLSLYEMSFTPFLPPSLNLLIKLRSLNLRRCKLGDIRMVAKLSNLEILSLEKSSIEELPEEITHLTHLRLLNLTDCYELRVIPTNLTSNLTCLEELYMGGCNSIEWEVEGSRSESKNASLSELQNLHNLTTLEISIKDTSVLSRGFQFPAKLETYNILIGNISEWGRSQNWYGEALGPSRTLKLTGSSWTSISSLTTVEDLRLAELKGVKDLLYDLDVEGFPQLKHLHIHGSDELLHIINSRRLRNPHSSAFPNLKSLLLYNLYTMEEICHGPIPTLSFAKLEVIKVRNCHGLDNLLLYSLARNLSQLHEMEINNCRCMKEIIAMEEHEDEKELLEIVLPELRSLALVELTRLQSFCLPLTVDMGDPSIQGIPLALFNQQVVTPKLETLELYDMDICKIWDDKLPLHSCFQNLTHLIVGRCNSLTSLFASWMGRGLVKLQYLTIYCCQMLKAIFVQEDQFPNSETVEISIMNDWKSIRPNQEPPNSFHHNLKINIYDCESMDFVFPVSAAKELRQHQFLEIRSCGIKNIFEKSDITCDMTHVYLEKITVEKCPGMKTIIPSFVLFQCLDKLIVSSCHTLVNIIRPSTTTSLPNLRILRISECDELEEIYGSNNESDDAPLGEIAFRKLEELTLKYLPRLTSFCQGSYDFRFPSLQIVSIEECPVMDTFCQGNITTPSLTKVEYRLSRDNWCRIEDHWYGDLNTTVRTVFTKKYLYDDWETLDIRNNNNLKSIWPNQVTPDFFPNLTKIVIYLCESQYVFPIYVAKVLRQLQVLEIGLCTIENIVEESDSTCEMMVVYLEVRKCHDMMTIVPSSVQFHSLDELHVSRCHGLVNIIMPSTIANLPNLRILMISECDELEEVYGSNNESDEPLGEIAFMKLEELTLKYLPWLKSFCQGSYNFKFPSLQKVHLKDCPMMETFCHGNLTTTSHIEVRCLYGWSNEESEDHWDGDLNTTIRTIFTKENTK* 1486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2038 1485 SUPERFAMILY L domain-like 463 849 - -
Gso15g2038 1485 Gene3D Ribonuclease Inhibitor 881 1312 IPR032675 -
Gso15g2038 1485 Gene3D Ribonuclease Inhibitor 636 858 IPR032675 -
Gso15g2038 1485 Gene3D Ribonuclease Inhibitor 1316 1454 IPR032675 -
Gso15g2038 1485 Gene3D Ribonuclease Inhibitor 491 635 IPR032675 -
Gso15g2038 1485 Coils Coil 846 866 - -
Gso15g2038 1485 Coils Coil 28 48 - -
Gso15g2038 1485 PANTHER PHOSPHATASE, PUTATIVE-RELATED 1100 1204 - -
Gso15g2038 1485 PANTHER PHOSPHATASE, PUTATIVE-RELATED 509 982 - -
Gso15g2038 1485 PANTHER PHOSPHATASE, PUTATIVE-RELATED 1357 1457 - -
Gso15g2038 1485 PANTHER PHOSPHATASE, PUTATIVE-RELATED 10 477 - -
Gso15g2038 1485 SUPERFAMILY L domain-like 871 1201 - -
Gso15g2038 1485 PRINTS Disease resistance protein signature 174 189 - -
Gso15g2038 1485 PRINTS Disease resistance protein signature 248 262 - -
Gso15g2038 1485 PRINTS Disease resistance protein signature 340 354 - -
Gso15g2038 1485 PRINTS Disease resistance protein signature 584 600 - -
Gso15g2038 1485 Gene3D - 144 303 IPR027417 -
Gso15g2038 1485 Pfam NB-ARC domain 158 390 IPR002182 GO:0043531
Gso15g2038 1485 SMART AAA_5 171 308 IPR003593 -
Gso15g2038 1485 Gene3D - 306 393 IPR042197 -
Gso15g2038 1485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 404 IPR027417 -
Gso15g2038 1485 PANTHER - 1100 1204 - -
Gso15g2038 1485 PANTHER - 1357 1457 - -
Gso15g2038 1485 PANTHER - 10 477 - -
Gso15g2038 1485 PANTHER - 509 982 - -
Gso15g2038 1485 SUPERFAMILY RNI-like 1239 1443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2038 Gso-Chr15 47393087 47406360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2038 158 477 WRKY Transcription Factor Family AT5G45050 26.748 6.42e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2038 - - gmx:100807425 2928.66