Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2028 ATGACCGACGAAGACAAACCCAAAGCCTTCTCCGGCCACCACCATCACCCTCCTCCACCGCAGCCACAACCCTTTCCCGCCGCCCAGTACGGCACCTTCCAAGGCGTCGCCAACTACCCTCCTCCGCCGCAGCCGCACCCCGCCATCGGCTTCCCTCACCCCGTTCCGCCGCCAGGCGCCGCCGACTCCTCCGCCCCTCCTCCGCCGTACTACCCGGGGTACCAAGCCGTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTAAGAGAACGCCACCTTGGTTGCTGTGGCCTTGGTTGTGGCTGGTGTCTGTTTATATTAGGCTTCTTTCTTGCTGGTATTCCATGGTACGTCGGGGCAATAATTATGCTTTGTTCCAGAGTAGACTATCGAGAGAAACCTGGATATATTGCTTGTGTAGTTGCTGCTGTTCTGGGTACAATTGCGATTATTCTTGGTGTGACAAAGGGAGTAGATGATTGGTAA 486 0.5638 MTDEDKPKAFSGHHHHPPPPQPQPFPAAQYGTFQGVANYPPPPQPHPAIGFPHPVPPPGAADSSAPPPPYYPGYQAVPGYAVAEGRPVRERHLGCCGLGCGWCLFILGFFLAGIPWYVGAIIMLCSRVDYREKPGYIACVVAAVLGTIAIILGVTKGVDDW* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2028 161 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 2 161 - -
Gso15g2028 161 MobiDBLite consensus disorder prediction 38 69 - -
Gso15g2028 161 MobiDBLite consensus disorder prediction 1 69 - -
Gso15g2028 161 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 2 161 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2028 Gso-Chr15 47170892 47174639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2028 30 161 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 36.667 1.24e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2028 - - gmx:100810998 251.906