Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2021 ATGGAAGCAGCATCGGCCACAATTCTGCTACTGATACTAATTCTTGCTCTGATATGCTCATGGAAGGTTCTGAACTGGTTATGGCTGAGACCAAAGAGACTAGAAAAACTGCTAAGAGAGCAAGGTTTTCGTGGCAATCCATACACCCTTTTCTTTGGAGACTCCAAGGAGTTTCTCAAGATGAGAAAGGAAGCCGTATCCAAACCCATGACCCTCTCTGATGACATAGTGCCACGTGTCTCTGCCTATGTCCAACATAGTGTTAACAAGCATGGTAAGAATTCTTTTATCTGGTTTGGACCAATGCCAAGGGTGACCATCTTAGATCCGGAGCAAATCAAAGATGTATTTAACAAGAACTATGACTTCCCAAAGCCTAATTTGAATCCACTTGTCAAGTTACTAGCAACTGGCCTTGCAGGCTATGAAGGAGAAAAGTGGAGCAAGCACAGAAGAATAATCAACCCTGCTTTCAATTTAGAAAAATTGAAGATCATGTTACCATTGTTCCTCCAAAGTTGCAATGATCTGGTTAGCAAATGGGAAGGAATGTTGTCTTCAGAGGGATCATGTGAAATGGATGCATGGCCTTTCCTTCAGAATCTGACTAGCGATGTTATTGCTCGATCAGCATTCGGAAGTAGCTATGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAACAAACTGAACATTTAATGAAAGTTATATTGAAAATTCAAATCCCTGGATGGAGGTTTCTGCCTACTAAAACCCATAGGAGGATGAAGGAAATTGACAGAGAAATAAAAGCTTCGCTCAAGAATATGATTAACAAGAGGGAAAAGGCACTAAAATCGGGTGAAGCCACTAAGAATGACCTATTAGGTATACTTTTGGAGTCCAATCACAAGGAAATTCAAGAACACGGAAACAGAAACAGTAAGAATGTTGGAATGAGTCTTGAAGATGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAGGAAACCACGTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGCCTTTCAAGTCTTTGGATACCAAAAACCAGATTTTGATGGGTTAAGTCGCCTAAAGATTGTCACCATGATTTTGTACGAGGTTCTTAGATTATACCCACCGCTAATTGGGATGAATCGATTGGTTGAAAAGGATGTGAAACTTGGAAACCTAACATTACCAGCTGGAGTGCAGGTTTTCCTCCCAACAGTTTTGATTCACCATGACAGTGAATTATGGGGTGAAGATGCTAAGCAGTTTAATCCCGAGAGATTTTCTGAAGGAGTTTTAAAAGCAACAAATGGAAGAGTTTCATTTTTTCCCTTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCTTATTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAGAATTTCTTATTTGAACTTTCTCCAGCATATGCTCATGCTCCGACTATGTCAATTACTACTCAGCCACAGTATGGTGCTCATATCATTCTACGTAAAGTGCCAATATGA 1563 0.4024 MEAASATILLLILILALICSWKVLNWLWLRPKRLEKLLREQGFRGNPYTLFFGDSKEFLKMRKEAVSKPMTLSDDIVPRVSAYVQHSVNKHGKNSFIWFGPMPRVTILDPEQIKDVFNKNYDFPKPNLNPLVKLLATGLAGYEGEKWSKHRRIINPAFNLEKLKIMLPLFLQSCNDLVSKWEGMLSSEGSCEMDAWPFLQNLTSDVIARSAFGSSYEEGRRIFQLQREQTEHLMKVILKIQIPGWRFLPTKTHRRMKEIDREIKASLKNMINKREKALKSGEATKNDLLGILLESNHKEIQEHGNRNSKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEAFQVFGYQKPDFDGLSRLKIVTMILYEVLRLYPPLIGMNRLVEKDVKLGNLTLPAGVQVFLPTVLIHHDSELWGEDAKQFNPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSMILQNFLFELSPAYAHAPTMSITTQPQYGAHIILRKVPI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2021 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gso15g2021 520 Pfam Cytochrome P450 86 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 SUPERFAMILY Cytochrome P450 81 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PANTHER CYTOCHROME 11 514 - -
Gso15g2021 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 514 - -
Gso15g2021 520 Gene3D Cytochrome P450 77 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2021 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2021 Gso-Chr15 46979894 46985903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2021 1 518 Cytochrome P450 AT3G14690 56.647 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2021 - K23809 gmx:100808851 1018.84