Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2020 ATGGAAGCAGCATGGGCCACAATTCTGACTCTGATACTGATACTCGCTCTGATATGTGCATGGAAGGTGCTGATCTGGTTATGGCTGAGGCCAAAGAGACTAGAAAAGCTGCTAAGAGAGCAAGGCCTTCAAGGGAATCCATACACACTTTTTGTTGGAGACTCCAAGGAGTTTCTGAAGATGAGAAAGGAAGCCTTATCCAAACCCATGAATCTCTCTGATGACATAATACCACGTGTTTCTTCCTATGAACAACATAGTGTCAACAAACATGGTAAGAATTCTTTTATCTGGTTAGGACCAATACCAAGAGTGACCATCTTAGATCCGGAGCAAATTAAAGATGTATTTAACAAGATCTATGACTTCCCAAAGCCTAATATGAATCCACTTGTCAAGTTACTAGCGACTGGACTAGCAGGCTATGAAGGAGAAAAGTGGAGTAAGCACAGAAGGATAATCAACCCTGCTTTTAATTTAGAAAAATTGAAGATTATGTTACCATTGTTCTTCAAAAGTTGCAACGATCTGGTTAGCAAATGGGAAGGCATGTTGTCTTCAGAGGGATCGTGTGAAATGGATGCATGGCCTTTCCTTCAAAATCTGGCTAGTGATGTTATCGCTCGATCCGCATTTGGAAGTAGCTATGAAGAAGGAAGAAGAATATTTCAACTCCAAAGAGAGCAAGCTGAACTTTTAATTAAAGTTCTATTGAAAATTCAAATCCCCGGATGGAGATTTCTACCAACTAATACCCATAGAAGAATGAAGGAAATTGACAGAGATATAAAGGCTTCACTCAAGGATATGATTAACAAGAGGGAGAAGGCACTGAAGGCGGGTGAAGCCACTAAGAATGACCTATTAGGTATACTTTTGGAGTCCAATCACAAGGAAATTCAAGAACATGGAAACAGAAACAATAAGAATGTTGGAATGAGTCTTGAAGAAGTAATCGAGGAATGCAAGTTTGCAGGACAGGAAACCACCTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTCTTTCAAGTCTTTGGATACCAAAAACCAGATTTTGATGGGTTAAGTCGCCTAAAGATTGTCACTATGATTTTGTACGAGGTTCTTAGATTATACCCTCCGGTAGCTGGGATGACTCGATCTATTGAAAAGGATGTGAAACTTGGAACCCTAACATTACCAGCTGGAGTACATGTTTTACTTCCAACAATTTTGATTCACCATGATCGCAAATTCTGGGGTGAAGATGCTAAACAGTTCAATCCTGAGAGATTTTCCGAAGGAGTTCTAAAAGCAACAAATGGTAGGGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCTTATTGGAAGCAAAGATGGCTTTGTCAATGATTTTGCAGCATTTCTCATTTGAACTTTCTCCAGCATATGCTCATGCTCCAATTGCGTTGATTACTATTCAGCCACAGTATGGTGCTCATATCATTCTACGTAAAGTCACAATATGA 1554 0.399 MEAAWATILTLILILALICAWKVLIWLWLRPKRLEKLLREQGLQGNPYTLFVGDSKEFLKMRKEALSKPMNLSDDIIPRVSSYEQHSVNKHGKNSFIWLGPIPRVTILDPEQIKDVFNKIYDFPKPNMNPLVKLLATGLAGYEGEKWSKHRRIINPAFNLEKLKIMLPLFFKSCNDLVSKWEGMLSSEGSCEMDAWPFLQNLASDVIARSAFGSSYEEGRRIFQLQREQAELLIKVLLKIQIPGWRFLPTNTHRRMKEIDRDIKASLKDMINKREKALKAGEATKNDLLGILLESNHKEIQEHGNRNNKNVGMSLEEVIEECKFAGQETTSVLLVWTMVLLSRYPDWQARAREEVFQVFGYQKPDFDGLSRLKIVTMILYEVLRLYPPVAGMTRSIEKDVKLGTLTLPAGVHVLLPTILIHHDRKFWGEDAKQFNPERFSEGVLKATNGRVSFFPFGWGPRICIGQNFSLLEAKMALSMILQHFSFELSPAYAHAPIALITIQPQYGAHIILRKVTI* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2020 517 Pfam Cytochrome P450 89 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PANTHER CYTOCHROME 11 511 - -
Gso15g2020 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 511 - -
Gso15g2020 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gso15g2020 517 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 SUPERFAMILY Cytochrome P450 85 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso15g2020 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2020 Gso-Chr15 46972718 46979375 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2020 1 515 Cytochrome P450 AT3G14690 57.006 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2020 - K23809 gmx:100808323 1003.05