Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2011 ATGAGGAATTCCCTGGTTATAGCCTTTTCCATAACCATATGCTTCATCGCTTTTGTGATATCGAAGATTGTTATCTCAGTCCTCCTCTACAAAAGATGGAGAAGAAAACATTTGATTCATGAAGAAGGTTATCCAGGTATGGAGGCAAAAGATTATCCAGGAGGGAAGATAGTAATATTTAGGTCCTCAGTGCTTAAATCTCTCACAACTGATGTGATCTTAAAGAAGACACAGAAACTGAACAGCAAGGACATCATTGGATCAGGTGGTTATGGTGTGGTTTATGAACTAAAACTAGATGACTCCACGGCCTTGGCAATAAAAAGACTAAATCGCGGAACTGCAGAGAGAGATAAAGGTTTTGAGAGAGAGTTGGAAGCAATGGCAGACATAAAGCACCGCAACATTGTGACACTTCATGGATATTACACTGCACCACTCTACAATCTTCTCATATATGAGCTAATGCCCCATGGAAGTTTGGATTCCTTTTTGCATGGGAGATCAAGGGAGAAGGTTTTGGATTGGCCAACCAGATATAGAATAGCTGCAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGCATCCCTCACATTATCCACAGAGACATAAAGTCAAGTAACATATTGTTGGATCAAAATATGGATGCCCGAGTTTCTGATTTTGGATTAGCCACGTTGATGCAACCAAATAAAACTCATGTCTCAACAATTGTGGCTGGAACTTTTGGATACTTGGCACCTGAATATTTTGATACAGGAAGAGCAACACTGAAAGGGGATGTTTACAGCTTTGGAGTTGTTTTGCTGGAGCTTTTAACTGGGAAAAAACCCAGTGATGAAGCATTTATGGAAGAGGGGACTATGCTTGTCACATGGGTGAAGGCTGTTGTTCGAGACAAAAAGGAGGAGTTAGTTCTCGATAATAGCTTAGGGAATTGTTCAATGAAAGAGGTAAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAACCAGATCCCTTGAAGAGGCCAACCATGGCTGAAGTTGTCACTTTGCTTGAGCAAACAGAACCAGATAAACTCATTACTGCATCATGA 1086 0.407 MRNSLVIAFSITICFIAFVISKIVISVLLYKRWRRKHLIHEEGYPGMEAKDYPGGKIVIFRSSVLKSLTTDVILKKTQKLNSKDIIGSGGYGVVYELKLDDSTALAIKRLNRGTAERDKGFERELEAMADIKHRNIVTLHGYYTAPLYNLLIYELMPHGSLDSFLHGRSREKVLDWPTRYRIAAGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMDARVSDFGLATLMQPNKTHVSTIVAGTFGYLAPEYFDTGRATLKGDVYSFGVVLLELLTGKKPSDEAFMEEGTMLVTWVKAVVRDKKEELVLDNSLGNCSMKEVNKVFNIAMMCLEPDPLKRPTMAEVVTLLEQTEPDKLITAS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2011 361 Gene3D Transferase(Phosphotransferase) domain 1 156 358 - -
Gso15g2011 361 SMART serkin_6 80 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2011 361 PANTHER BNAA07G39120D PROTEIN 1 354 - -
Gso15g2011 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gso15g2011 361 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Gso15g2011 361 Pfam Protein kinase domain 82 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2011 361 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 354 - -
Gso15g2011 361 ProSiteProfiles Protein kinase domain profile. 80 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g2011 361 SUPERFAMILY Protein kinase-like (PK-like) 58 351 IPR011009 -
Gso15g2011 361 Gene3D Phosphorylase Kinase; domain 1 48 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2011 Gso-Chr15 46778613 46781988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2011 5 351 Receptor kinase-like Gene Family AT2G35620 45.429 2.34e-97 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Gso15g2011 Pkinase 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2011 - - ahf:112703495 561.992