Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso15g2010 | ATGCCTAACCCTAAGGTCTTCTTCTACATGACCATTGGTGGGCAGCTTGTTGGTCGCATCATGATGGAGCTCTATGCCAACATGACTCCTCGCACTGCCGGGAACTTCTACGCGCTCTGCACCGACGAAAAAGGCGTAAGGCAGAGTTGTAAGCCCCTTCATTACAAGGGCTCATCCTTCCACCGCGTGATCTTGAGCTTCATGTGTCAGGGTGGCCACTTCACCTCCGAAAAAGGAAGTGGCAGCAAGTTGATCTATGGTGCCAAGTTCGCTGTGAAGAAACACACTGGTCCCAATATCTGCTCTATGGAAAACGCCAGTCCCATAACCAATAGATCACAGTTCTTTATTTGCGCAGAGAAGACAAAATGGCTTGATGAAATTGGGAGGTGA | 393 | 0.4936 | MPNPKVFFYMTIGGQLVGRIMMELYANMTPRTAGNFYALCTDEKGVRQSCKPLHYKGSSFHRVILSFMCQGGHFTSEKGSGSKLIYGAKFAVKKHTGPNICSMENASPITNRSQFFICAEKTKWLDEIGR* | 131 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso15g2010 | 130 | PIRSF | Peptidylpro_ismrse | 1 | 128 | IPR024936 | GO:0003755 | |
| Gso15g2010 | 130 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 7 | 126 | IPR002130 | GO:0000413|GO:0003755 | |
| Gso15g2010 | 130 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 127 | - | - | |
| Gso15g2010 | 130 | Gene3D | - | 1 | 128 | IPR029000 | - | |
| Gso15g2010 | 130 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 | 1 | 127 | - | - | |
| Gso15g2010 | 130 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 55 | 72 | IPR020892 | GO:0003755|GO:0006457 | |
| Gso15g2010 | 130 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 24 | 39 | IPR002130 | GO:0000413|GO:0003755 | |
| Gso15g2010 | 130 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 60 | 72 | IPR002130 | GO:0000413|GO:0003755 | |
| Gso15g2010 | 130 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 99 | 114 | IPR002130 | GO:0000413|GO:0003755 | |
| Gso15g2010 | 130 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 114 | 126 | IPR002130 | GO:0000413|GO:0003755 | |
| Gso15g2010 | 130 | SUPERFAMILY | Cyclophilin-like | 2 | 126 | IPR029000 | - | |
| Gso15g2010 | 130 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 9 | 127 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso15g2010 | Gso-Chr15 | 46649424 | 46649816 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gso15g2010 | 18 | 117 | U-box Gene Family | AT5G67530 | 38.095 | 8.80e-14 | 65.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso15g2010 | K01802 | - | gmx:100790465 | 264.618 |