Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2004 ATGGTAACCATTGTGGCTTCTTACAATGTCACTCCAAATCAACCAACTCCCAAGGATCCTTTATGGCTATCCGATAGTGACCTAATCGGCAACCTAGGTCACATATCCGTCATCTATATTTACAAAGCTAAACACAACACCGACACCATTGAGAGGTTGAGGAATTCGCTTAGCAAGATTTTGGTCTACTTCTATCCCGTAGCTGGCAGGTTGAACTTGACAAAAAGTGGTCGAATAGAAGTGGATTGTAATGCAAAAGGGGTGAGATTGCTTGAAGCTGAAACCACAAAAACATTTGGTGATTATGGAGATTTTTCACCCTCCGAGTCCACCGAGGAACTTGTTCCAAAAGTTGATAATACTCAACCCAGAGAGGAAATTCCCCTGCTGCTACTTCAATTAACAAGGTTCCTTGGTGGTGATGAAGGCCTTGCCATTGGAGTTACTTTCGCTCATCCTTTGATTGATGCCACCGGCCTCGTTCACTTCATCAATAGTTGGGCAAAGCTGGCTCGAGGAGAAGCACTAGAGCCTAATGAAATGCCTTTGCTCAATCGAACAATACTCAAATTCCAACACCAGCCATCATCCTCACAAGTCCTTGGTTCGAGTGAAACCGAGTTCGATCCACATAAGCAAGATCTCGAGAAGCCTATAGCACAAACACCGTTGGGAGTAGAGCGAAAGAAGGTAAGTGCTACAATCTTGAAACTCACATCAAGCCACCTGGAGAGGCTAAAGAAGAAGGCTAATGATCAACCTTCAAAAGAAGGGTCAAGACCTTATACCAGATTTGAAGTTGTTGCTGCTCATATATGGAGATGTGCATCCAAGGCTCGTGAATCTGGTGAGAACCACCCAACCCTAGTTACTTTTAGTGTTAATTTTCGCAATAGATTGAATCCTCCTCTCCCTCAGAATTATTTTGGGAATGCTCTGGCAAAAGTAGTGACACCCGAATGTTATGAGGGAGATATCATATCAAACCCATTAGGTTTTGCTGCTCAAAAGATAAGGGAAGCAGCTCAAATGGTTACGGATGAGTCTATAAGGTCACAACTACATGCTAGTTTAGGCCAAGGGCAACTGAATCACATAAGGGCTTTTTTCACGGGACATGCACACAGTATTAATATTCCTTTTGATGTGAATCATAGCATTTTCCTCACAAGCTGGATGAACATGCCAGTGTATGAATCAGATTTTGGTTGGGAAAAGCCTTTGCATTTTGGTATAGTAAGTCGGGCTCAAGTAGATAGGGCAACCATTCTTCCAAGCCCTGATGGGGATGGTGTTGTTATCACTATATTTTTCCAGACAGCACTTATGGAGCTTTTCTTAAAGTTCTTCTTCGAGGATATGGATAATATGGAGATATGA 1380 0.4268 MVTIVASYNVTPNQPTPKDPLWLSDSDLIGNLGHISVIYIYKAKHNTDTIERLRNSLSKILVYFYPVAGRLNLTKSGRIEVDCNAKGVRLLEAETTKTFGDYGDFSPSESTEELVPKVDNTQPREEIPLLLLQLTRFLGGDEGLAIGVTFAHPLIDATGLVHFINSWAKLARGEALEPNEMPLLNRTILKFQHQPSSSQVLGSSETEFDPHKQDLEKPIAQTPLGVERKKVSATILKLTSSHLERLKKKANDQPSKEGSRPYTRFEVVAAHIWRCASKARESGENHPTLVTFSVNFRNRLNPPLPQNYFGNALAKVVTPECYEGDIISNPLGFAAQKIREAAQMVTDESIRSQLHASLGQGQLNHIRAFFTGHAHSINIPFDVNHSIFLTSWMNMPVYESDFGWEKPLHFGIVSRAQVDRATILPSPDGDGVVITIFFQTALMELFLKFFFEDMDNMEI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2004 459 Pfam Transferase family 1 447 - -
Gso15g2004 459 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 454 - -
Gso15g2004 459 Gene3D - 223 452 IPR023213 -
Gso15g2004 459 Gene3D - 1 208 IPR023213 -
Gso15g2004 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2004 Gso-Chr15 46245006 46246853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2004 2 452 Monolignol Biosynthesis Gene Families AT5G48930 33.921 1.32e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2004 K13065 - gmx:102663900 915.99