Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g2001 ATGGAGAAAGAGGAGAGCACGGAACAGCGAAAGCAAGCGATGCTCGCCATTATGGAGCTCGCTAACATGATAAGCGTACCGATGGCGTTAAACGCCGTCGTTCGCCTCAACGTCGCCGACGCCCTCTGGCAAGGTGGCGCCAACGCCCCCCTCTCCGCCTCCGAGATCCTCCCCCGCATCCTCCCCGGCGCCGACGGCGCCGACGCCGAGAACCTCCAGCGGCTCCTCCGTATGCTTGCCAGCTACGGCGTCTTCCGCGAGCACCTCGCCGCCGGCGAACGGAACTACTCCCTCACTGAGGTTGGCAAAACGCTCGTCACCGATGAACAAGGCTTGTCATACGCACATTACGTGCTCCAACACCACCAGGATGCGTTGATGCGAGCGTGGCCATTGGTGCACGAGGCAGTAGTGGACCCTACAAAGGAGCCCTTCGAGATGGCCAATGGAGAGCCAGCATATGGGTACTATCTGAAGCAGCCAGAGATGAATGACCTAATGGTGAGGGCTATGTCAGGGGTGTCAGTGCCCTTCATGAGGGCCATGCTAGAGGGCTATGATGGCTTCCAAGGTGTGGAGAAGCTTGTGGATGTGGGTGGTAGTGGTGGAGATTGCCTTCGTATGATCTTGCAAAAACACCCCACCATCAAAGAAGGGATCAACTTTGACCTACCTGAAGTTGTGGCCAAAGCCCCTCAAATCCCATGTGTAACCCATGTTGGCGGTGACATGTTCAAGTCTATTCCCCAAGGAGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACTGATGAAGAATGCAAGCACATAATGCAGAGCTGTCACAAGGCACTCCCTGAGGGAGGCAAACTAATAGCATGTGAGCCAGTGCTGCCAGAGCACTCAGACGAGAGTCACAGAACGAGGGCTTTGCTTGAAGGTGACATTTTTGTGATGACAATCTATAGAGCTAAAGGGAAGCACAGGACTGAAGAACAGTTCAGGCAATTAGCCATTGATGCAGGCTTCCCTCGTTTCAGAGCCTTCCATGTTGACCATTTCTACACTGTCCTTGAGTTTCAGAAATGA 1071 0.5406 MEKEESTEQRKQAMLAIMELANMISVPMALNAVVRLNVADALWQGGANAPLSASEILPRILPGADGADAENLQRLLRMLASYGVFREHLAAGERNYSLTEVGKTLVTDEQGLSYAHYVLQHHQDALMRAWPLVHEAVVDPTKEPFEMANGEPAYGYYLKQPEMNDLMVRAMSGVSVPFMRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTIKEGINFDLPEVVAKAPQIPCVTHVGGDMFKSIPQGDAIFMKWVLTTWTDEECKHIMQSCHKALPEGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLAIDAGFPRFRAFHVDHFYTVLEFQK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g2001 356 Gene3D - 1 110 IPR036388 -
Gso15g2001 356 Pfam O-methyltransferase domain 134 337 IPR001077 GO:0008171
Gso15g2001 356 Gene3D Vaccinia Virus protein VP39 111 356 IPR029063 -
Gso15g2001 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Gso15g2001 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Gso15g2001 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 108 IPR036390 -
Gso15g2001 356 PANTHER OS02G0823400 PROTEIN 3 355 - -
Gso15g2001 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 356 IPR016461 GO:0008168
Gso15g2001 356 PANTHER O-METHYLTRANSFERASE 3 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g2001 Gso-Chr15 46104956 46109592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g2001 3 356 Monolignol Biosynthesis Gene Families AT3G53140 73.743 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g2001 - - gmx:102663764 724.546