Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g1997 ATGCAGCAAGATCAGCTCAAGAAGGATATGAAGGAGGTAGAGTTTTTCACTGAGTATGGCGATGCCAACAGATACAAGATTCTTGAAGTTGTTGGGAAGGGTAGCTATGGAGTTGTTTGTTCAGCAATCGATACACACACTGGGGGAAAGGTTGCAATTAAGAAGATTCATGATATTTTTGAACATATCTCTGATGCCATTAGAATCCTCAGGGAAGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATCATGTTGCCGCCTTCAAAGAGGGAGTTTAAAGATATTTATGTAGTCTTTGAGCTTATGGAGTCTGATCTCCATCAGGTCATCAAAGCTAATGACGACTTGACCCGCGAACACCATCAGTTTTTTCTTTATCAGATGCTACGTGCAATGAAGTATATGCATACAGCTAATGTATATCACAGAGACCTTAAGCCCAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGATTTTGGATTGGCTAGAGTTGCATTCAGTGATGCCCCAACAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTACAGAGCCCCAGAACTATGTGGCTCCTTCTTTTCAAAGTATACACCAGCAATTGATATATGGAGCATTGGATGCATTTTTGCAGAGGTGTTGACAGGAAAGCCACTGTTTCCTGGTAAAAGTGTCGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCACCACCTGAAACTATTGCAGGAGTTCGAAATGACAAGGCAAGGAAGTACTTGATGGAAATGCGGAAGAAATCTCCTGTGCCATTTGAACAGAAATTTCCGAATGCGGATCCATTGGCACTTCGCCTATTGCAAAGACTTTTAGCATTTGATCCAAAGGATCGACCAACTGCTCAAGAGGCACTAGCTGATCCCTTCTTTAAGGGTTTGGCCAAAGTTGAGAGAGAACCTTCTTGTCAGCCAATTTCAAGATTAGAATTTGAGTTTGAGAGGAGACGAGTGACAAAAGATGATGTTAGGGAGCTAATATATCGGGAAATATTGGAATACCATCCCCAGTTGCTTAAAGATTACATGAATGGAACTGAAGGCACTCACTTCCTTTACCCTAGTGCAATAGATCAATTCAGAAAGCACTTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGCCCAGTGATACCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGTACAATTCCTCCTAGTACACAACCATCTTTTACTTCATACGAGAACAAGCATATGGCAGAAGAGGCATCAAAGGTTACGAGATCAGTAGAATCAAATTCCGGAAGTCAATTAAGGAGTTCGCGACCTCCGCCAAGAGTGCCAGCAGCCAAACCAGGTCGAATCGTAGGGCCAGTTTTGCACTATGACAATGGGAGAACCTTAAAAGACACTTATGACCAAAGGATCTTCTACCGAAACACGCTTCCTCAAGCCGTCTCTCCACACTGTTTCCATAGGGTGCAGCAACCTACTATCACAAAAACTACTTCAGAAACATACAAGAATATCCCCCAAGGCAAACATCAACTCCCATCCCAACAGTGTAGCATGCCAGCTAGACCAACTATTGATCTAAATACCAACCCATACTACCAACAGGGAAAGAGTGATCACTTAAATGATCCTGTTGCTTCCATTGATGCAAAACTACTGCAGGCACAATCTCAATTTGGTGGAGTTGGTGCTGCAGCAGTAGCTGTTGCTGCTCACAGGCATTCAGGGAGCTTTCAGTATGGATTGTCATAG 1824 0.4249 MQQDQLKKDMKEVEFFTEYGDANRYKILEVVGKGSYGVVCSAIDTHTGGKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAMKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDAPTTTFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPPPETIAGVRNDKARKYLMEMRKKSPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAQEALADPFFKGLAKVEREPSCQPISRLEFEFERRRVTKDDVRELIYREILEYHPQLLKDYMNGTEGTHFLYPSAIDQFRKHFAYLEENHGKSGPVIPPERKHVSLPRSTVHSSTIPPSTQPSFTSYENKHMAEEASKVTRSVESNSGSQLRSSRPPPRVPAAKPGRIVGPVLHYDNGRTLKDTYDQRIFYRNTLPQAVSPHCFHRVQQPTITKTTSETYKNIPQGKHQLPSQQCSMPARPTIDLNTNPYYQQGKSDHLNDPVASIDAKLLQAQSQFGGVGAAAVAVAAHRHSGSFQYGLS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g1997 607 MobiDBLite consensus disorder prediction 397 474 - -
Gso15g1997 607 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1997 607 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Gso15g1997 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 483 - -
Gso15g1997 607 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gso15g1997 607 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gso15g1997 607 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Gso15g1997 607 MobiDBLite consensus disorder prediction 414 436 - -
Gso15g1997 607 MobiDBLite consensus disorder prediction 445 460 - -
Gso15g1997 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 483 - -
Gso15g1997 607 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso15g1997 607 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g1997 607 CDD STKc_TDY_MAPK 24 361 - -
Gso15g1997 607 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g1997 Gso-Chr15 46003124 46007563 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g1997 1 605 MAP Kinase Gene Family AT1G53510 70.161 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso15g1997 Pkinase 2.3e-64 CL0016